| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3934 |
|---|
| Symbol | livH |
|---|
| ID | 6871245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3771184 |
|---|
| End bp | 3772110 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642786893 |
|---|
| Product | branched-chain amino acid transporter permease subunit LivH |
|---|
| Protein accession | YP_002217521 |
|---|
| Protein GI | 198243928 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC AGTTTCTCTA TTTCTTGCAG CAGATGTTTA ACGGCGTCAC GCTGGGGAGC
ACCTACGCGC TGATTGCTAT CGGTTATACG ATGGTGTACG GCATTATCGG CATGATCAAC
TTCGCTCATG GCGAGGTGTA TATGATCGGC AGCTACGTCT CTTTTATGAT CATCGCCGCG
CTAATGATGA TGGGAATAGA CACCAGTTGG CTCCTGGTGG CCGCCGGATT TATCGGCGCG
ATTATTATTG CCAGCGCCTA CGGCTGGAGT ATCGAGCGAG TCGCTTACCG GCCCGTGCGC
AACTCCAAGC GCCTGATTGC CCTGATTTCC GCCATCGGGA TGTCCATCTT CCTGCAAAAC
TACGTCAGCC TGACGGAAGG TTCGCGCGAC GTGGCGTTAC CCAGCCTGTT TAACGGCCAG
TGGATTGTGG GCAGCAGCGA AAACTTTTCC GCGTCCATCA CCACCATGCA GGCGGTTATC
TGGATAGTCA CCTTTCTGGC TATGCTGGCG CTCACCATTT TCATTCGCTA CTCCCGGATG
GGCCGCGCCT GCCGCGCCTG CGCGGAGGAT CTGAAAATGG CCAGCCTGCT CGGCATTAAT
ACCGACCGCG TCATTGCGCT AACGTTTGTT ATCGGCGCGG CAATGGCGGC GGTGGCGGGC
GTGCTGCTCG GTCAGTTCTA TGGCGTAATT AACCCCTACA TCGGTTTTAT GGCCGGGATG
AAAGCGTTCA CCGCGGCGGT GCTGGGCGGT ATTGGCAGCA TCCCGGGCGC GATGATCGGC
GGTCTGATTT TGGGCGTTGC CGAAGCGCTC TCGTCTGCAT ATTTAAGTAC CGAATATAAA
GATGTCGTAT CGTTCGCTCT GCTGATTCTG GTACTGCTGG TGATGCCGAC CGGTATCCTG
GGGCGTCCGG AGGTAGAGAA AGTATGA
|
|---|
| Protein sequence | MSEQFLYFLQ QMFNGVTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFMIIAA
LMMMGIDTSW LLVAAGFIGA IIIASAYGWS IERVAYRPVR NSKRLIALIS AIGMSIFLQN
YVSLTEGSRD VALPSLFNGQ WIVGSSENFS ASITTMQAVI WIVTFLAMLA LTIFIRYSRM
GRACRACAED LKMASLLGIN TDRVIALTFV IGAAMAAVAG VLLGQFYGVI NPYIGFMAGM
KAFTAAVLGG IGSIPGAMIG GLILGVAEAL SSAYLSTEYK DVVSFALLIL VLLVMPTGIL
GRPEVEKV
|
|---|
| |