Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3880 |
Symbol | gntX |
ID | 6875600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3708652 |
End bp | 3709335 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642786842 |
Product | gluconate periplasmic binding protein |
Protein accession | YP_002217470 |
Protein GI | 198244770 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAACAG TACCGGGATT ATGCTGGCTA TGCCGAATGC CGCTGGCGTT AAGCCACTGG GGAATTTGTT CCGTATGCGC GCGCGCCGTT CGTCAGCGCG TCAGCCTGTG CCCGCAATGC GGATTACCTG CCGCGCATCC TTCGCTCCCC TGCGGTCGCT GCCTGCAAAA ACCTCCGCCC TGGCAGCGTC TGGTGAGCGT CAGTGACTAT ACGCCGCCCT TGAGTTTACT GGTGCATCAG CTTAAATTTA CCCGCCGCAG CGAAATTGCC GCCGCTCTGG CGCGTCTACT GTTGCAGGAA GTACTCATGG CGCGCCGCAG CACTGGCTTG CAGCTTCCCG ACAGAATCGT CAGCGTTCCG CTCTGGTCGC GCCGACACTG GCGGCGGGGA TTTAACCAAA GCGATATGTT ATGCCAACCG TTAGCGCGCT GGCTTGGCTG CGCGTGGGAC AGCCAGACCA TCACGCGGGT ACGGGCGACC GCAACACAAC ATCATCTCAG CGCCAGGTTA CGTAAGCGCA ATTTGAAAAA CGCGTTTCGC CTTGAATTGC CGGTACAGGG TCTCCATATG GTTATTGTGG ATGATGTCGT CACTACCGGA AGTACCGTCG CGGAAATCGC GCAACTGCTT TTGCGCAACG GCGCAGCGAC TGTCCAGGTA TGGTGCCTGT GTCGAACCTT GTAG
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Protein sequence | MLTVPGLCWL CRMPLALSHW GICSVCARAV RQRVSLCPQC GLPAAHPSLP CGRCLQKPPP WQRLVSVSDY TPPLSLLVHQ LKFTRRSEIA AALARLLLQE VLMARRSTGL QLPDRIVSVP LWSRRHWRRG FNQSDMLCQP LARWLGCAWD SQTITRVRAT ATQHHLSARL RKRNLKNAFR LELPVQGLHM VIVDDVVTTG STVAEIAQLL LRNGAATVQV WCLCRTL
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