Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3871 |
Symbol | ompR |
ID | 6872298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3699550 |
End bp | 3700269 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786833 |
Product | osmolarity response regulator |
Protein accession | YP_002217461 |
Protein GI | 198243980 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGA ATTATAAGAT TCTGGTGGTT GATGACGATA TGCGTCTGCG GGCGCTACTG GAACGTTATC TGACCGAGCA GGGCTTCCAG GTTCGAAGCG TCGCTAACGC TGAGCAGATG GATCGTCTGC TGACCCGTGA ATCTTTCCAT CTCATGGTAC TGGATTTAAT GCTGCCAGGT GAAGATGGTC TGTCGATTTG TCGTCGCCTG CGTAGTCAAA GTAATCCAAT GCCGATCATT ATGGTCACGG CGAAGGGTGA AGAGGTTGAC CGTATCGTCG GGCTGGAAAT CGGCGCCGAT GACTACATTC CTAAACCGTT TAACCCGCGC GAGCTGTTGG CGCGTATTCG CGCCGTGTTA CGTCGTCAGG CAAACGAACT GCCCGGCGCG CCGTCGCAGG AAGAGGCCGT TATCGCGTTC GGTAAGTTTA AACTGAACCT CGGTACGCGC GAGATGTTCC GTGAAGATGA ACCGATGCCG CTGACCAGCG GGGAGTTTGC GGTACTGAAA GCGTTAGTCA GCCATCCGCG CGAGCCGCTC TCTCGCGATA AGCTGATGAA TCTGGCCCGT GGCCGCGAGT ATTCCGCGAT GGAACGCTCC ATCGACGTCC AGATCTCCCG CCTGCGCCGT ATGGTGGAAG AAGATCCGGC ACATCCGCGT TATATTCAGA CCGTCTGGGG CCTGGGCTAC GTCTTTGTAC CGGACGGTTC TAAAGCATGA
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Protein sequence | MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL RRQANELPGA PSQEEAVIAF GKFKLNLGTR EMFREDEPMP LTSGEFAVLK ALVSHPREPL SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA
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