Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3849 |
Symbol | trpS |
ID | 6875683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3676186 |
End bp | 3677190 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786814 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_002217442 |
Protein GI | 198244372 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC CCATCGTTTT TAGTGGCGCA CAGCCCTCAG GTGAATTGAC CATTGGCAAC TATATGGGGG CATTGCGTCA GTGGGTAAAC ATGCAGGATG ACTATCATTG CATCTACTGC ATCGTAGACC AACATGCTAT TACCGTGCGT CAGGACGCGC AGCAGCTACG TAAAGCGACG CTGGATACGC TGGCGCTGTA CCTGGCATGT GGTATTGATC CTGAAAAGAG CACTATTTTC GTTCAGTCCC ATGTGCCGGA ACATGCGCAG CTTGGCTGGG CGCTGAACTG CTATACCTAT TTCGGCGAGC TGAGCCGTAT GACGCAGTTT AAAGATAAAT CTGCGCGCTA TGCGGAAAAC ATTAACGCCG GCCTGTTTGA TTACCCGGTG TTGATGGCGG CAGACATCCT GTTGTACCAA ACCAATCTGG TGCCGGTAGG CGAAGATCAG AAGCAGCATC TGGAACTGAG CCGCGATATC GCCCAGCGTT TTAACGGGCT GTATGGCGAT ATTTTCAAAG TACCGGAACC GTTTATTCCA AAATCCGGCG CGCGAGTGAT GTCGCTGCTG GAGCCGACAA AGAAAATGTC CAAATCGGAC GATAACCGTA ATAACGTGAT CGGCCTGCTG GAAGATCCGA AATCGGTAGT GAAGAAAATC AAACGTGCGG TCACTGACTC CGACGAGCCG CCGGTAGTGC GTTATGATGT GAAAGAGAAA GCGGGTGTCT CTAACCTGCT GGATATCCTT TCCGCCGTGA CCGGTCAGAG CATTCCTGAA CTGGAAAAAC AGTTTGAAGG TAAAATGTAT GGCCATTTGA AAGGCGAAGT GGCGGAGGCG GTTTCCGGAA TGCTGTCTGA GTTGCAGGAG CGCTATCACC GTTTCCGCAA CGACGAAGCG TTCTTACAGA AGGTGATGAA AGACGGGGCG GAAAAAGCCA GCGCACGTGC GGCCGAAACG CTGAAAGCCG TTTACGAAGC CATTGGCTTT GTGGCGAAAC CGTAA
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Protein sequence | MTKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDYHCIYC IVDQHAITVR QDAQQLRKAT LDTLALYLAC GIDPEKSTIF VQSHVPEHAQ LGWALNCYTY FGELSRMTQF KDKSARYAEN INAGLFDYPV LMAADILLYQ TNLVPVGEDQ KQHLELSRDI AQRFNGLYGD IFKVPEPFIP KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDPKSVVKKI KRAVTDSDEP PVVRYDVKEK AGVSNLLDIL SAVTGQSIPE LEKQFEGKMY GHLKGEVAEA VSGMLSELQE RYHRFRNDEA FLQKVMKDGA EKASARAAET LKAVYEAIGF VAKP
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