Gene SeD_A3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3849 
SymboltrpS 
ID6875683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3676186 
End bp3677190 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID642786814 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002217442 
Protein GI198244372 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC CCATCGTTTT TAGTGGCGCA CAGCCCTCAG GTGAATTGAC CATTGGCAAC 
TATATGGGGG CATTGCGTCA GTGGGTAAAC ATGCAGGATG ACTATCATTG CATCTACTGC
ATCGTAGACC AACATGCTAT TACCGTGCGT CAGGACGCGC AGCAGCTACG TAAAGCGACG
CTGGATACGC TGGCGCTGTA CCTGGCATGT GGTATTGATC CTGAAAAGAG CACTATTTTC
GTTCAGTCCC ATGTGCCGGA ACATGCGCAG CTTGGCTGGG CGCTGAACTG CTATACCTAT
TTCGGCGAGC TGAGCCGTAT GACGCAGTTT AAAGATAAAT CTGCGCGCTA TGCGGAAAAC
ATTAACGCCG GCCTGTTTGA TTACCCGGTG TTGATGGCGG CAGACATCCT GTTGTACCAA
ACCAATCTGG TGCCGGTAGG CGAAGATCAG AAGCAGCATC TGGAACTGAG CCGCGATATC
GCCCAGCGTT TTAACGGGCT GTATGGCGAT ATTTTCAAAG TACCGGAACC GTTTATTCCA
AAATCCGGCG CGCGAGTGAT GTCGCTGCTG GAGCCGACAA AGAAAATGTC CAAATCGGAC
GATAACCGTA ATAACGTGAT CGGCCTGCTG GAAGATCCGA AATCGGTAGT GAAGAAAATC
AAACGTGCGG TCACTGACTC CGACGAGCCG CCGGTAGTGC GTTATGATGT GAAAGAGAAA
GCGGGTGTCT CTAACCTGCT GGATATCCTT TCCGCCGTGA CCGGTCAGAG CATTCCTGAA
CTGGAAAAAC AGTTTGAAGG TAAAATGTAT GGCCATTTGA AAGGCGAAGT GGCGGAGGCG
GTTTCCGGAA TGCTGTCTGA GTTGCAGGAG CGCTATCACC GTTTCCGCAA CGACGAAGCG
TTCTTACAGA AGGTGATGAA AGACGGGGCG GAAAAAGCCA GCGCACGTGC GGCCGAAACG
CTGAAAGCCG TTTACGAAGC CATTGGCTTT GTGGCGAAAC CGTAA
 
Protein sequence
MTKPIVFSGA QPSGELTIGN YMGALRQWVN MQDDYHCIYC IVDQHAITVR QDAQQLRKAT 
LDTLALYLAC GIDPEKSTIF VQSHVPEHAQ LGWALNCYTY FGELSRMTQF KDKSARYAEN
INAGLFDYPV LMAADILLYQ TNLVPVGEDQ KQHLELSRDI AQRFNGLYGD IFKVPEPFIP
KSGARVMSLL EPTKKMSKSD DNRNNVIGLL EDPKSVVKKI KRAVTDSDEP PVVRYDVKEK
AGVSNLLDIL SAVTGQSIPE LEKQFEGKMY GHLKGEVAEA VSGMLSELQE RYHRFRNDEA
FLQKVMKDGA EKASARAAET LKAVYEAIGF VAKP