Gene SeD_A3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3793 
SymbolrpsH 
ID6872945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3630213 
End bp3630605 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID642786760 
Product30S ribosomal protein S8 
Protein accessionYP_002217388 
Protein GI198243127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.114774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAGGCCGCG 
AACAAAGCTG CGGTCACCAT GCCTTCCTCC AAGCTGAAAG TGGCAATTGC CAACGTGCTG 
AAGGAAGAAG GTTTTATTGA AGATTTTAAA GTTGAAGGCG ACACCAAGCC GGAACTGGAA 
CTGACTCTTA AGTATTTCCA GGGTAAAGCT GTTGTAGAAA GCATTCAGCG TGTCAGCCGC 
CCAGGTCTGC GCATCTACAA ACGTAAAGAT GAGCTGCCGA AAGTTATGGC CGGTCTGGGT 
ATCGCAGTTG TTTCTACCTC TAAAGGTGTT ATGACTGATC GTGCAGCGCG CCAGGCTGGT 
CTTGGTGGCG AAATTATCTG CTACGTAGCC TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKAAVTMPSS KLKVAIANVL KEEGFIEDFK VEGDTKPELE 
LTLKYFQGKA VVESIQRVSR PGLRIYKRKD ELPKVMAGLG IAVVSTSKGV MTDRAARQAG 
LGGEIICYVA