Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3770 |
Symbol | |
ID | 6872868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3615465 |
End bp | 3616007 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786739 |
Product | topoisomerase DNA-binding C4 zinc finger domain-containing protein |
Protein accession | YP_002217367 |
Protein GI | 198243895 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.380857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAT CAGCACTGTT TTCGGTGCGT AAAAATGAGC CCTGCCCGCA GTGCGGGGCC GAACTGGTAA TTCGTTCCGG GAAACATGGT CCGTTTCTCG GCTGTTCTCG CTATCCGGAA TGCGATTACG TTCGTCCGCT GAAAAGTCAG GCGGACGGAC ATATCGTTAA AATTCTGGAG GGGCAACTGT GTCCTGAGTG TGGCGCCGTA CTGGTGCTGC GTCAGGGGCG CTTTGGCATG TTCATCGGAT GCAGTCAGTA TCCGCAATGT GAACATACAG TGGTTATTGA TAAACCGGAT GAAACGGCGA TTGCCTGTCC AGCCTGCCAG CAAGGACATT TGGTCCAGCG CCGTTCTCGT TACGGAAAAA TCTTTCATTC CTGCGATCGC TACCCGGAAT GTCAGTTCGT CATTAACTTC ACACCGGTTG CGGGGGAATG CCCCGAGTGC CATTATCCGC TACTCATCGA AAAGAAAACC GCGCAGGGCG TGAAGCGCTT TTGCGCCAGT AAACAATGTG GAAAGCCGGT TCCGGTGGAA TAA
|
Protein sequence | MAKSALFSVR KNEPCPQCGA ELVIRSGKHG PFLGCSRYPE CDYVRPLKSQ ADGHIVKILE GQLCPECGAV LVLRQGRFGM FIGCSQYPQC EHTVVIDKPD ETAIACPACQ QGHLVQRRSR YGKIFHSCDR YPECQFVINF TPVAGECPEC HYPLLIEKKT AQGVKRFCAS KQCGKPVPVE
|
| |