| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3742 |
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| Symbol | panF |
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| ID | 6874295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3593089 |
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| End bp | 3594540 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642786717 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_002217351 |
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| Protein GI | 198245619 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.133198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG AGGTCATTCT ACCGCTGGTA GCCTATCTGG TCGTGGTCTT CGGGGTCTCG
ATTTACGCTA TGCGCAAGCG TACCGCCGGC ACTTTTTTAA ACGAATATTT TCTTGGCAGC
CGTTCGATGG GCGGGATCGT GCTCGCGATG ACGCTTACCG CCACCTATAT TAGCGCCAGT
TCATTTATCG GCGGTCCCGG CGCGGCTTAT AAATACGGTC TGGGCTGGGT CTTGCTGGCG
ATGATCCAGC TTCCCGCCGT CTGGCTTTCA CTGGGTATTC TGGGTAAAAA ATTCGCTATC
CTGGCGCGTC GCTATAATGC CGTCACGCTT AACGATATGC TATTCGCGCG TTACCAAAGC
CGCCTGCTGG TGTGGTTGGC AAGCCTGAGT TTATTGGTCG CGTTTATTGG CGCAATGACC
GTACAATTTA TCGGCGGCGC GCGACTGCTG GAAACCGCGG CGGGAATTCC CTACGAAACC
GGCCTGCTAA TATTTGGCGT CAGTATCGCA CTCTATACGG CGTTTGGCGG CTTTCGCGCC
AGCGTACTTA ACGATACGCT ACAGGGCCTG GTGATGCTGG TCGGCACGAT AGTGCTGCTG
GTGGGCGTGA TCCATGCGGC GGGCGGTCTA AGTCAGGCCG TTGACACGCT GCACGCTCTC
GACCCCAAAC TGGTAACGCC GCAGGGCGCC GATGACATAC TTTCTCCCGC CTTTATGACC
TCTTTTTGGG TACTGGTCTG TTTTGGTGTG ATTGGCCTGC CGCATACGGC GGTGCGCTGC
ATCTCCTATA AAGACAGTAA AGCGGTACAC CGGGGCATTA TTATCGGTAC GATTGTCGTG
GCGATTTTAA TGTTCGGGAT GCACCTTGCC GGCGCGCTGG GTCGCGCGGT GCTTCCGGAT
CTGACGGTGC CGGATCTGGT GATCCCAACG CTAATGGTGA AAGTTTTGCC GCCGTTTGCC
GCCGGGATCT TCCTCGCTGC GCCAATGGCG GCGATCATGT CAACAATTAA CGCCCAACTG
CTGCAAAGTT CCGCGACGAT CATTAAAGAT CTCTATCTCA ACCTGCGCCC CGATCAGATG
CAAAATGAGA TCCGGCTGAA GCGTATGTCG GCAGCGATTA CATTACTGCT AGGCGCGCTG
TTGCTGCTGG CCGCATGGAA ACCGCCAGAG ATGATCATTT GGCTCAACCT GCTGGCGTTT
GGCGGCCTGG AAGCGGTGTT CTTATGGCCG CTGGTATTGG GCCTTTACTG GGAGCGGGCA
AACGCGGCAG GCGCATTAAG CGCCATGATC GTGGGCGGCG TGCTATATGC CCTGCTTGCC
ACATTTAATA TTCAGTACCT GGGCTTTCAT CCGATTGTGC CCGCGTTACT GTTAAGTTTA
TTGGCTTTTC TGATCGGAAA CCGATTCGGC TCTTCCGCTT CGCAAGCCAC CGTATTGTCT
ACTGATAAAT AA
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| Protein sequence | MQLEVILPLV AYLVVVFGVS IYAMRKRTAG TFLNEYFLGS RSMGGIVLAM TLTATYISAS
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGILGKKFAI LARRYNAVTL NDMLFARYQS
RLLVWLASLS LLVAFIGAMT VQFIGGARLL ETAAGIPYET GLLIFGVSIA LYTAFGGFRA
SVLNDTLQGL VMLVGTIVLL VGVIHAAGGL SQAVDTLHAL DPKLVTPQGA DDILSPAFMT
SFWVLVCFGV IGLPHTAVRC ISYKDSKAVH RGIIIGTIVV AILMFGMHLA GALGRAVLPD
LTVPDLVIPT LMVKVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLNLRPDQM
QNEIRLKRMS AAITLLLGAL LLLAAWKPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAAGALSAMI VGGVLYALLA TFNIQYLGFH PIVPALLLSL LAFLIGNRFG SSASQATVLS
TDK
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