Gene SeD_A3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3717 
Symbol 
ID6871819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3566094 
End bp3566759 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID642786692 
Producttranscriptional regulator 
Protein accessionYP_002217326 
Protein GI198242951 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.531066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.297823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAGC CTAAGTTAGG GAAGATTAAG CTTCTTTCAG CGAAAGAACA GGTCGCGGCA 
GTGCTGCGTA AAGCGATTCT TTCGAGGGAG TTAGTAGAAG GGCAGGAGAT TACGTTAGAA 
GGCATTGCCA GAATGGTCGG CGTGTCCAGT ATGCCAGTGC GCGAGGCGTT TCAGATTCTG 
GCGGCGGATG GGCTGATAAA AGTGCGCCCT AATAAAGGGG CGGTGGTGTT GGGCATCAAT 
GAACAAACGA TCCGTGAACA CTATGAAATT CGCGCGCTAT TAGAAAGTGA GGCGGTGGCT 
AAAGCTTCTC GTCCTGGCAC CGATATCTCG CGGATAGCCC AGGTGCATTA TGCCGCTGAA 
AAGGCTCTCG CGGAAAATAA CTCGGCGGAA TACTCCGACC TGAATCAGGC ATTTCATATG 
GAAATATGGA ATGTTGCTGG CAACGAAAAA ATGAAAATGT TGCTCTGTAA TATGTGGAAC 
GGCCTGTCGA TGGGCCATAA GGTCACCGAA GAAGAGTATG CCGTGATTTC CATTCAGGAA 
CATAAAAGTA TTCTGCAAGC TCTTGAACTT CATGATGAAA CATTGGCACG CCAGCGCATG 
CGCGAACACA TTATTCGCTC AATGGAGAAT ATGCTGACCC GCTATGTTGG TGACCCTTCT 
GCCTGA
 
Protein sequence
MQKPKLGKIK LLSAKEQVAA VLRKAILSRE LVEGQEITLE GIARMVGVSS MPVREAFQIL 
AADGLIKVRP NKGAVVLGIN EQTIREHYEI RALLESEAVA KASRPGTDIS RIAQVHYAAE 
KALAENNSAE YSDLNQAFHM EIWNVAGNEK MKMLLCNMWN GLSMGHKVTE EEYAVISIQE 
HKSILQALEL HDETLARQRM REHIIRSMEN MLTRYVGDPS A