Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3712 |
Symbol | oadA |
ID | 6874038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3560879 |
End bp | 3562651 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642786687 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_002217321 |
Protein GI | 198245592 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG CCATTACCGA CGTCGTCCTG CGTGACGCCC ACCAGTCCCT GTTCGCCACC CGCCTGCGCC TTGATGACAT GCTGCCGATT GCCGCCGCGC TCGATGACGT GGGCTACGGC TCGCTGGAGT GCTGGGGCGG CGCCACCTTT GACGCCTGTA TCCGCTTTCT CGGCGAAGAC CCGTGGCTGC GCCTGCGCGA GCTTAAAAAG GCCATGCCGA AGACTCCCCT GCAGATGCTG CTGCGCGGCC AGAACCTGCT CGGCTACCGC CATTACGCCG ATGATGTGGT GGAACGCTTC GTTGAGCGGG CGGTGAAAAA CGGCATGGAC GTGTTCCGCG TCTTCGATGC CATGAACGAC CCGCGCAATA TGAAGGCCGC CCTGCAGGCG GTGCGCAGCC ACGGCGCGCA CGCCCAGGGC ACGCTGAGCT ATACCACCAG CCCGGCGCAC ACCCTGCAGA CCTGGCTGGA TTTAACCGAA CAGTTGTTAG AGACCGGCGT CGATTCCATC GCCATCAAGG ATATGTCCGG CATTCTCACG CCGATGGCGG CGTATGAGCT GGTGAGCGAA ATCAAAAAAC GCTATGACGT GCGCCTGCAC CTGCACTGCC ATGCCACCAC CGGGATGGCG GAGATGGCGC TGCTGAAGGC CATCGAGGCG GGCGTCGACG GCGTGGACAC GGCGATTTCC TCCATGAGCG CCACCTACGG CCACCCGGCC ACCGAAGCGC TGGTGGCGAC GTTGGCAGGT ACTGAGCACG ACACCGGGCT GGATATCCTG AAGCTGGAAA ATATCGCCGC GTACTTCCGC GAGGTGCGCA AAAAGTATCA CGCCTTTGAA GGCCAGCTGA AGGGCTACGA CAGCCGTATT CTGGTGGCCC AGGTACCGGG CGGAATGCTC ACCAACCTCG AAAGCCAGCT GAAGCAGCAG AACGCGGCGG ACAAACTCGA CCAGGTGCTG GCGGAAATCC CCCGCGTGCG CGAGGACCTC GGCTTTATCC CGCTGGTGAC CCCGACCTCG CAGATTGTCG GCACCCAGGC GGTGCTCAAT GTCCTGACCG GCGAGCGCTA CAAAACCATT GCCAAAGAAA CGGCGGGCAT TCTGAAAGGC GAATACGGCC ACACCCCGGT GCCGGTGAAC GCCGCGTTAC AGGCCCGCGT GCTGGAAGGG GGCGCTCCGG TGACCTGCCG CCCGGCGGAC CTGCTGAAGC CGGAGCTGGC TGAACTGGAA GCGGACGTCA GGCGCCAGGC GCAGGAGAAG GGCATTCAGC TTGCGGGAAA CGCCATCGAC GACGTGCTCA CCGTGGCGCT GTTCCCGCAG ATTGGGCTGA AATTCCTCGA AAACCGCCAT AACCCGGCGG CGTTTGAGCC ACTGCCGCAG GCGGAAGCCG CGCAGCCGGT GGCAAAAGCA GAGAAGCCTG CCGCTTCCGG TATCTACACC GTGGAAGTGG AAGGCAAAGC CTTTGTGGTG AAGGTCAGCG ACGGCGGCGA TATCAGCCAG CTTACTGCGG CTTCGTCTGC GCCGGTTCAG GCGGCATCCC CGGTTGCTCC GGCGGGCGCC GGCACACCGG TCACCGCGCC GCTGGCGGGC AACATCTGGA AGGTGATTGC CGCTGAAGGC CAGACGGTGG CCGAAGGCGA CGTGCTGCTG ATTCTGGAAG CCATGAAGAT GGAAACCGAA ATCCGCGCCG CGCAGGCCGG GACGGTACGC GGTATCGCGG TGAAGTCCGG GGACGCGGTT TCCGTGGGCG ACACCCTGAT GACGCTGGCG TAA
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Protein sequence | MTIAITDVVL RDAHQSLFAT RLRLDDMLPI AAALDDVGYG SLECWGGATF DACIRFLGED PWLRLRELKK AMPKTPLQML LRGQNLLGYR HYADDVVERF VERAVKNGMD VFRVFDAMND PRNMKAALQA VRSHGAHAQG TLSYTTSPAH TLQTWLDLTE QLLETGVDSI AIKDMSGILT PMAAYELVSE IKKRYDVRLH LHCHATTGMA EMALLKAIEA GVDGVDTAIS SMSATYGHPA TEALVATLAG TEHDTGLDIL KLENIAAYFR EVRKKYHAFE GQLKGYDSRI LVAQVPGGML TNLESQLKQQ NAADKLDQVL AEIPRVREDL GFIPLVTPTS QIVGTQAVLN VLTGERYKTI AKETAGILKG EYGHTPVPVN AALQARVLEG GAPVTCRPAD LLKPELAELE ADVRRQAQEK GIQLAGNAID DVLTVALFPQ IGLKFLENRH NPAAFEPLPQ AEAAQPVAKA EKPAASGIYT VEVEGKAFVV KVSDGGDISQ LTAASSAPVQ AASPVAPAGA GTPVTAPLAG NIWKVIAAEG QTVAEGDVLL ILEAMKMETE IRAAQAGTVR GIAVKSGDAV SVGDTLMTLA
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