Gene SeD_A3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3699 
SymbolnanA 
ID6875705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3548953 
End bp3549846 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content54% 
IMG OID642786675 
ProductN-acetylneuraminate lyase 
Protein accessionYP_002217309 
Protein GI198242925 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00683] N-acetylneuraminate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CATTGCAAGG CGTAATGGCG GCGTTGTTGA CCCCATTTGA TCATCAGCAG 
CAACTGGATA GCGAAAGCCT GCGCCGTCTG GTGCGTTTTA ACATTGGGCA GGGTATCGAC
GGGCTGTACG TTGGCGGTTC CACCGGGGAA GCATTCGTAC AGAGCCTTGC TGAAAGAGAG
CAGGTACTGG AGATTGTCGC CGAAGAGGCG AAGGGAAAAA TCACGTTGAT CGCCCATGTC
GGGACAGTAA GCACCGCAGA AAGCCAGCAG CTTGCCAGCG CCGCAAAGCG TTACGGTTTT
GATGCGGTCT CTGCGGTGAC GCCTTTTTAT TACCCTTTCA GTTTTGAAGA GCACTGTGAC
CATTATCGGG CAATCATTGA TTCCGCAGAT GGATTGCCGA TGGTGGTATA CAACATTCCG
GCGTTAAGCG GCGTAAAACT TACCCTCGAT CAGATCAATA CGCTGGTGAC ATTACCGGGC
GTGAGCGCGC TGAAGCAAAC CTCCGGCGAT CTCTTCCAGA TGGAGCAGAT CCGCCGCGCG
CATCCGGATC TGGTGCTGTA CAACGGTTAT GACGAAATCT TCGCTTCCGG TCTGCTGGCG
GGCGCGGACG GCGGTATCGG CAGCACATAC AACATTATGG GCTGGCGTTA TCAGGGGATT
GTTCAGGCAT TACGTGAGGG CGATGTGGCG AAAGCGCAGC GCCTGCAAAC CGAGTGCAAT
AAGGTTATTG ATTTACTGAT TAAAACCGGC GTATTCCGCG GCCTGAAAAC GGTCCTGCAT
TATATGGACG TGCTATCGGT GCCGCTGTGT CGTAAACCGT TTGCGCCTGT TGATGAAAAA
TACCTGCCGG CGCTCAAGGC GCTGGCTCAA CAACTGATGG AAGAAAAGGC GTAA
 
Protein sequence
MAKALQGVMA ALLTPFDHQQ QLDSESLRRL VRFNIGQGID GLYVGGSTGE AFVQSLAERE 
QVLEIVAEEA KGKITLIAHV GTVSTAESQQ LASAAKRYGF DAVSAVTPFY YPFSFEEHCD
HYRAIIDSAD GLPMVVYNIP ALSGVKLTLD QINTLVTLPG VSALKQTSGD LFQMEQIRRA
HPDLVLYNGY DEIFASGLLA GADGGIGSTY NIMGWRYQGI VQALREGDVA KAQRLQTECN
KVIDLLIKTG VFRGLKTVLH YMDVLSVPLC RKPFAPVDEK YLPALKALAQ QLMEEKA