Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3674 |
Symbol | kdsD |
ID | 6874702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3521796 |
End bp | 3522782 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642786652 |
Product | D-arabinose 5-phosphate isomerase |
Protein accession | YP_002217286 |
Protein GI | 198244781 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.835894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0549633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT TAGCGTTGCA ACCGGGGTTT GACTTTCAGC AGGCAGGCAA AGAGGTCCTG GAAATTGAAC GTGAAGGCCT GGCGGAGCTT GATCAATATA TCAACCAGCA TTTCACGCTG GCCTGTGAAA AAATGTTCAA CTGCACCGGA AAAGTGGTGG TCATGGGGAT GGGAAAATCC GGTCATATCG GACGGAAAAT GGCCGCCACG TTCGCCAGTA CCGGCACCTC TTCCTTTTTT GTACATCCAG GCGAAGCCGC GCACGGCGAT TTGGGGATGG TTACGCCGCA GGATGTGGTT ATCGCTATCT CCAACTCCGG CGAATCCAGC GAGATCGCGG CGCTAATACC GGTACTTAAA CGTCTGCACG TGCCGTTAAT TTGCATTACC GGGCGACCGG AAAGCAGCAT GGCGCGTGCG GCAGATGTGC ATCTGTGTGT TAAAGTGCCC AAAGAAGCGT GTCCGTTAGG ACTGGCGCCT ACCAGTAGTA CCACCGCAAC GCTGGTGATG GGCGACGCGC TCGCTGTGGC GTTGTTAAAA GCGCGCGGCT TTACCGCCGA GGATTTCGCT CTGTCGCATC CTGGCGGCGC GCTGGGACGT AAGCTACTGC TGCGCGTAAG CGATATTATG CATACTGGCG ATGAGATCCC GCATGTTAAT AAACATGCCA CCCTGCGTGA TGCGCTGTTA GAAATTACGC GTAAAAATCT CGGTATGACC GTCATTTGCG ATGAATCCAT GAAGATCGAC GGTATCTTCA CCGACGGCGA TTTACGTCGC GTGTTCGATA TGGGCGGCGA TATGCGCCAG TTGGGGATCG CCGAGGTGAT GACGCCAGGG GGCATTCGCG TGCGTCCCGG TATTCTCGCC GTCGATGCGC TGAATTTAAT GCAGTCCCGC CATATCACCT CCGTACTGGT TGCTGATGGC GACCAGTTAC TCGGTGTGTT ACATATGCAT GATCTCCTGC GTGCAGGCGT CGTGTAG
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Protein sequence | MSHLALQPGF DFQQAGKEVL EIEREGLAEL DQYINQHFTL ACEKMFNCTG KVVVMGMGKS GHIGRKMAAT FASTGTSSFF VHPGEAAHGD LGMVTPQDVV IAISNSGESS EIAALIPVLK RLHVPLICIT GRPESSMARA ADVHLCVKVP KEACPLGLAP TSSTTATLVM GDALAVALLK ARGFTAEDFA LSHPGGALGR KLLLRVSDIM HTGDEIPHVN KHATLRDALL EITRKNLGMT VICDESMKID GIFTDGDLRR VFDMGGDMRQ LGIAEVMTPG GIRVRPGILA VDALNLMQSR HITSVLVADG DQLLGVLHMH DLLRAGVV
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