Gene SeD_A3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3625 
Symbol 
ID6871311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3479813 
End bp3480175 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID642786609 
ProductGIY-YIG nuclease superfamily protein 
Protein accessionYP_002217245 
Protein GI198244348 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.791399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCT TTATTCTCGC TTATACTGGG AACCTGAAAA TTATCATGCT GATGGCGACA 
ATGACACCCT GGTATCTGTA TCTGATTCGT ACTGCAGACA ATGCGCTTTA CACCGGAATA
ACCACCGATG TGGCGCGTCG TTACAGGCAG CATCAAACGG GAAAAGGCGC AAAAGCATTA
CGGGGAAAAG GCGAGTTAAC GCTGGCGTTT GCGGCGCAGG TCGGCAATCG CTCGCTGGCC
CTGCGCATAG AGTATCGCAT CAAACAGCTC ACAAAGCGCC AGAAGGAGCG CCTTGTGACG
GAACGCGAAG CGTTTGAGGC GCTGCTGTCC AGCCTGCAAA CGCCGGTGCT TAAAAACGAT
TGA
 
Protein sequence
MSIFILAYTG NLKIIMLMAT MTPWYLYLIR TADNALYTGI TTDVARRYRQ HQTGKGAKAL 
RGKGELTLAF AAQVGNRSLA LRIEYRIKQL TKRQKERLVT EREAFEALLS SLQTPVLKND