Gene SeD_A3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3589 
Symbol 
ID6874773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp3445002 
End bp3445487 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID642786577 
Productputative inner membrane protein YqjF 
Protein accessionYP_002217213 
Protein GI198245936 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.24023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCT CCAGCGATAA CAATGACGCG CCAAACCGCG TCATTGCTCA TGAAAATAGC 
AGCAGCCGCC GAATCGGCCC CCTGGAGAAT AAAATGAAAA AATTAGAAGA TGTTGGTGTA 
CTGATAGCGC GTATTTTAAT GCCAGTTCTG TTTATTACCG CAGGATGGGG AAAAATTAGC 
GGCTATGCGG GCACACAGCA GTATATGGAA GCGATGGGCG TACCAGGATT CCTGCTGCCG 
CTCACCATAC TGCTTGAGTT CGGCGGCGGT CTGGCGATTC TGCTGGGGTT CCTCACCCGC 
ACCACTGCGC TTTTTACCGC TGGTTTTACG TTGCTGACGG CATTGATCTT CCATAGCAAT 
TTTGCAGAAG GTGTAAACTC GCTGATGTTT ATGAAAAACC TGACCATTGC CGGCGGATTC 
TTATTACTGG CGTTAACCGG GCCTGGCGCG TTCAGCCTTG GCCGTCTGCT GAATAAAAAG 
TGGTAA
 
Protein sequence
MILSSDNNDA PNRVIAHENS SSRRIGPLEN KMKKLEDVGV LIARILMPVL FITAGWGKIS 
GYAGTQQYME AMGVPGFLLP LTILLEFGGG LAILLGFLTR TTALFTAGFT LLTALIFHSN 
FAEGVNSLMF MKNLTIAGGF LLLALTGPGA FSLGRLLNKK W