Gene SeD_A3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3570 
Symbol 
ID6875875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3426206 
End bp3426973 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content56% 
IMG OID642786558 
Productsiderophore-interacting protein 
Protein accessionYP_002217194 
Protein GI198244925 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.416656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CATCCGTACG CTACCCACAG CGTGTTCGTA ATGAGCTGCG TTTTCGCGAG 
CTGATCGTTC TGCGGGTAGA ACGTATTAGC GCAGGATTTC AGCGGATCGT ACTTGGCGGC
GAGGCGCTGG ACGGTTTCAT CTCCCTGGGC TTTGACGATC ACACGAAAGT TTTTTTCCCT
GAGCCAGGCT GTCGCTTTAC GCCTCCGACA GTCACTGAGG AAGGCATTAT CTGGGGGGAG
GGCGTTCGCC CGGTCTCCAG GGATTACACG CCGCTGTATG ACGAGGCGCG TCGCGAGCTG
GCGCTGGATT TCTTTATCCA CGATGGCGGC GTAGCCAGCC GTTGGGCAAT GGAAGCCCGT
GAAGGCGATA CACTGACGAT CGGCGGGCCG CGCGGTTCGC TGGTGGTGCC GGAAGAGTAT
GCCTGTCAGG TTTATGTCTG CGATGAGTCC GGTATGCCTG CGCTACGTCG TCGTCTGGAA
TCGCTTAGCC GTCTGCCTGT GCGCCCTGCG GTAACCGCGC TGGTGAGCAT TCAGGATGCG
GCATACCGCG ATTATCTCGC CCATTTGACG GATATTACTG TGGAATATGT TGTTGGCGGC
GATGAACAGG CAATGCAAAC GCGCCTGTCG CAGCTGACAA TACCAGAATC AGACTATTTC
ATCTGGATTA CTGGCGAAGG CAAAACGGTA AAACGTTTAA GTCAGTGCTT TGAAAAGGGG
TTTGATCCAC ACCTGGTACG TGCGGCAGCC TATTGGCATC GTAAATAG
 
Protein sequence
MTTSSVRYPQ RVRNELRFRE LIVLRVERIS AGFQRIVLGG EALDGFISLG FDDHTKVFFP 
EPGCRFTPPT VTEEGIIWGE GVRPVSRDYT PLYDEARREL ALDFFIHDGG VASRWAMEAR
EGDTLTIGGP RGSLVVPEEY ACQVYVCDES GMPALRRRLE SLSRLPVRPA VTALVSIQDA
AYRDYLAHLT DITVEYVVGG DEQAMQTRLS QLTIPESDYF IWITGEGKTV KRLSQCFEKG
FDPHLVRAAA YWHRK