Gene SeD_A3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3566 
SymboldnaG 
ID6872816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3421553 
End bp3423298 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content52% 
IMG OID642786554 
ProductDNA primase 
Protein accessionYP_002217191 
Protein GI198242235 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0608711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.272103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAC GAATCCCACG CGTATTCATT AATGACCTGC TGGCGAGAAC CGATATCGTC 
GATCTGATCG ACGTGCGCGT AAAACTCAAG AAACAGGGCA AGAACTATCA CGCGTGTTGT
CCATTCCATA ATGAGAAAAC CCCTTCTTTC ACCGTAAACG GTGAAAAACA GTTTTATCAC
TGCTTTGGAT GCGGCGCGCA TGGCAATGCG ATCGACTTTT TAATGAATTA CGACAAACTC
GAATTTGTCG AAACCGTCGA AGAATTAGCG GCCATGCATA ACCTGGAAAT TCCCTATGAA
GCAGGCACCG GGCTTAGCCA GATAGAGCGC CATCAACGGC AAAACCTCTA TCAGTTGATG
AATGGTCTGA ATGACTTTTA TCAGCAGTCG CTTACCCATC CTGCGGCAAA ACCTGCGCGT
GACTATCTGC AAAAGCGCGG TCTGAGCGCT GAAATTATTC AGCGTTTCGC CATTGGCTTC
GCGCCGCCAG GGTGGGATAA CGCGTTAAAG CGCTTCGGTA ATAACAGCGA TAACAAGGCA
TTGTTGCTGG ATGCCGGGAT GCTGGTCAAT AACGAGCAGG GCAGCACTTA CGATCGTTTC
CGTAATCGGG TCATGTTCCC TATTCGGGAC AAACGCGGCA GGGTGATTGG TTTTGGCGGT
CGAGTACTGG GGAACGACAC GCCGAAATAC CTTAACTCTC CGGAAACGGA CATTTTCCAT
AAAGGCCGCC AGCTATATGG TCTTTATGAG GCTCAGCAAT ATAGTGCTGA ACCGCAACGC
TTGCTTGTGG TCGAAGGTTA TATGGATGTC GTCGCACTAG CGCAATACGA CATTAACTAT
GCGGTCGCTT CGCTGGGTAC CTCAACCACG GCAGACCATA TGCATATGTT ATTCCGGGCG
ACGAACAACG TAATTTGCTG TTACGACGGC GACCGGGCTG GCCGTGATGC CGCCTGGAGA
GCGCTGGAAA CAGCAATGCC TTATATGACC GACGGTCGGC AGGTACGCTT TATGTTTTTA
CCTGACGGCG AAGACCCGGA TACGCTGGTG CGTAAAGAAG GCAAGGCGGC TTTTGAAGCG
CGGATGGAGC AGGCGCAGCC GCTCTCTACG TTTCTGTTTA ATAGCCTCCT GCCGCAGGTG
GATTTAAGCT CGCCGGATGG CAGCACGCAG TTAGCCGCAC TGGCGCTGCC GCTCATTAAT
CAGGTGCCTG GCGACGCACA CCGTATTCAG TTGCGCCAGA CGTTGGGGCT GAAGTTAGGC
ATTTTCGATG ATAGTCAGCT TGATCATTTA GTGCCAAAAC AGGCGGAAAG CGGCGTTTCC
CGCCCGGCTC CGCAGCTAAA ACGCACGACC ATGCGTATAC TGATAGGATT ACTGGTGCAA
AATCCGGATC TCGCGCCGTT AGTGCCGCCC TTAGACGCGC TGGATCAGAA TAAGCTGCCT
GGACTTGGCT TATTTAAAGA ATTGGTCAAA ACTTGTCTGG CTCAGCCAGG TCTTACTACC
GGACAACTTC TGGAACTCTA CCGTGGCACA AATGATGCTG CGACCCTTGA AAAATTATCG
ATGTGGGACG ATATAGCAGA TAAGGCGATT GCCGAAAAGA CCTTTACCGA CTCACTCAAC
CATATGTTTG ATTCGCTGCT GCAACTGCGA CAAGAAGAGC TGATCGCTCG CGATCGCACT
CACGGTTTAA GCAGCGAAGA ACGCCGAGAG CTCTGGACGT TAAACCAGGA GCTGGCCAGA
AAATGA
 
Protein sequence
MAGRIPRVFI NDLLARTDIV DLIDVRVKLK KQGKNYHACC PFHNEKTPSF TVNGEKQFYH 
CFGCGAHGNA IDFLMNYDKL EFVETVEELA AMHNLEIPYE AGTGLSQIER HQRQNLYQLM
NGLNDFYQQS LTHPAAKPAR DYLQKRGLSA EIIQRFAIGF APPGWDNALK RFGNNSDNKA
LLLDAGMLVN NEQGSTYDRF RNRVMFPIRD KRGRVIGFGG RVLGNDTPKY LNSPETDIFH
KGRQLYGLYE AQQYSAEPQR LLVVEGYMDV VALAQYDINY AVASLGTSTT ADHMHMLFRA
TNNVICCYDG DRAGRDAAWR ALETAMPYMT DGRQVRFMFL PDGEDPDTLV RKEGKAAFEA
RMEQAQPLST FLFNSLLPQV DLSSPDGSTQ LAALALPLIN QVPGDAHRIQ LRQTLGLKLG
IFDDSQLDHL VPKQAESGVS RPAPQLKRTT MRILIGLLVQ NPDLAPLVPP LDALDQNKLP
GLGLFKELVK TCLAQPGLTT GQLLELYRGT NDAATLEKLS MWDDIADKAI AEKTFTDSLN
HMFDSLLQLR QEELIARDRT HGLSSEERRE LWTLNQELAR K