| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3564 |
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| Symbol | gcp |
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| ID | 6874081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3419862 |
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| End bp | 3420875 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642786552 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_002217189 |
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| Protein GI | 198243102 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000516178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.199213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTAC TGGGTATTGA AACATCCTGC GATGAAACCG GCATCGCTAT TTACGACGAC
AAAAAAGGTC TGTTAGCCAA CCAATTGTAT AGTCAGGTGA AATTACATGC TGACTACGGC
GGCGTAGTGC CTGAACTGGC TTCCCGCGAT CATGTGCGTA AAACCGTGCC GCTGATTCAG
GCGGCATTAA AAGAAGCCGG TCTGACGGCG AGCGATATCG ACGCGGTGGC CTATACCGCA
GGCCCGGGCC TGGTCGGCGC GCTGCTGGTC GGCGCAACCG TCGGGCGTTC GCTGGCATTT
GCCTGGAATG TGCCGGCCAT TCCTGTACAC CATATGGAAG GTCATCTGCT GGCGCCAATG
CTGGAAGATA ATCCCCCGGA ATTCCCGTTT GTGGCGCTAC TGGTCTCCGG CGGACATACG
CAGCTCATTA GCGTGACCGG AATCGGTCAG TACGAACTGC TGGGAGAGTC GATTGACGAT
GCCGCCGGTG AAGCGTTTGA TAAAACCGCC AAATTGTTGG GGCTGGATTA TCCTGGCGGC
CCGATGCTGT CGAAAATGGC GTCGCAGGGG ACGGCGGGAC GTTTTGTCTT TCCGCGCCCG
ATGACCGATC GCCCGGGGCT GGATTTTAGT TTTTCCGGTC TGAAAACCTT TGCCGCTAAC
ACCATTCGTA GTAATGGCGG CGACGAACAA ACTCGCGCTG ATATCGCGCG CGCTTTTGAA
GATGCGGTCG TGGATACGCT GATGATCAAG TGCAAGCGCG CGCTGGAAAG CACCGGTTTT
AAGCGTCTGG TCATGGCGGG CGGCGTCAGC GCTAACCGCA CGCTGCGCGC GAAGCTTGCC
GAAATGATGC AAAAACGCCG CGGCGAAGTG TTCTATGCGC GTCCGGAGTT TTGTACTGAC
AACGGGGCGA TGATCGCCTA TGCCGGAATG GTGCGGTTTA AGGCGGGCGT TACGGCGGAT
CTTGGCGTAA CGGTACGTCC GCGCTGGCCG CTGGCCGAGC TGCCGGCGGC GTAA
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| Protein sequence | MRVLGIETSC DETGIAIYDD KKGLLANQLY SQVKLHADYG GVVPELASRD HVRKTVPLIQ
AALKEAGLTA SDIDAVAYTA GPGLVGALLV GATVGRSLAF AWNVPAIPVH HMEGHLLAPM
LEDNPPEFPF VALLVSGGHT QLISVTGIGQ YELLGESIDD AAGEAFDKTA KLLGLDYPGG
PMLSKMASQG TAGRFVFPRP MTDRPGLDFS FSGLKTFAAN TIRSNGGDEQ TRADIARAFE
DAVVDTLMIK CKRALESTGF KRLVMAGGVS ANRTLRAKLA EMMQKRRGEV FYARPEFCTD
NGAMIAYAGM VRFKAGVTAD LGVTVRPRWP LAELPAA
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