| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3561 |
|---|
| Symbol | bacA |
|---|
| ID | 6870966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3417616 |
|---|
| End bp | 3418437 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642786549 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_002217186 |
|---|
| Protein GI | 198245722 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.0840276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TGCACTCGCT GCTGATAGCG GCAATTTTGG GTGTGGTCGA AGGATTGACG
GAGTTTTTGC CGGTATCCAG CACGGGCCAT ATGATTATTG TGGGTCATCT GCTGGGGTTT
GAAGGCGATA CGGCCAAGAC ATTCGAAGTG GTGATTCAAC TTGGATCTAT TCTGGCGGTC
GTGGTGATGT TCTGGCGGCG GTTGTTTGGC CTCATCGGTA TTCACTTTGG CCGCCCGCTA
CAGCGTGAAG GTGAAAGTAA AGGTCGATTA ACGTTGATTC ACATCCTGCT GGGCATGATT
CCGGCGGTGG TGCTGGGGTT AGTCTTTCAT GACACGATCA AGTCGCTATT TAACCCAATT
AACGTGATGT ACGCGCTGGT GGTAGGCGGT CTGTTGCTGA TTGCCGCCGA GTGCCTGAAG
CCGAAAGAAC CGCGCGCGTC GGGGCTGGAT GATATGACGT ATCGTCAGGC GTTTATGATT
GGCTGTTTCC AGTGTCTGGC GCTGTGGCCG GGCTTCTCGC GTTCCGGAGC GACCATTTCC
GGTGGGATGC TGATGGGCGT CAGCCGTTAC GCCGCCTCTG AGTTCTCGTT CTTACTGGCT
GTGCCGATGA TGATGGGCGC AACGGTTCTG GATCTCTACA AAAGTTGGTC ATTCCTGACC
GCAGCGGATA TTCCGATGTT CGCAGTGGGC TTTGTGACGG CGTTTGTGGT GGCGCTGATC
GCTATCAAGA CCTTCCTGCA ACTGATTAAG CGTATCTCGT TTATTCCGTT TGCGATTTAC
CGCTTTGTGG TGGCGGCTGC CGTTTACGTT GTTTTCTTCT GA
|
|---|
| Protein sequence | MSDMHSLLIA AILGVVEGLT EFLPVSSTGH MIIVGHLLGF EGDTAKTFEV VIQLGSILAV
VVMFWRRLFG LIGIHFGRPL QREGESKGRL TLIHILLGMI PAVVLGLVFH DTIKSLFNPI
NVMYALVVGG LLLIAAECLK PKEPRASGLD DMTYRQAFMI GCFQCLALWP GFSRSGATIS
GGMLMGVSRY AASEFSFLLA VPMMMGATVL DLYKSWSFLT AADIPMFAVG FVTAFVVALI
AIKTFLQLIK RISFIPFAIY RFVVAAAVYV VFF
|
|---|
| |