Gene SeD_A3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3547 
Symbol 
ID6870951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3404056 
End bp3404733 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID642786537 
Productputative disulfide oxidoreductase 
Protein accessionYP_002217174 
Protein GI198244537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.668443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA TTAAGGGATT ATGGCGAGAC CTACGCGCAA GACCAGTAGA TACGCTGGTG 
AGATGGCAGG AACAGCGCTT TCTGTGGCTG TTAATGGCCA TCGCGATGGG AGGGTTAATT
ATCCTGGCGC ACTCGTTCTT CCAAATCTAT CTCTACATGG CGCCGTGCGA ACAGTGTGTT
TACATTCGTT ACGCGATGTT TGTGATGGTA ATTGGCGGGG TGATTGCGGC GATAAATCCC
AAAAATATCG TGCTGAAGCT GATTGGCTGC ATCGCGGCGT TTTATGGCAG CATTATGGGC
ATTAAGTTTT CTATTAAGCT TAATGGTATC CATCATGCGG TACATAATGC GGACCCCGAT
TCACTTTTTG GCGTGCAAGG ATGTTCGACT GACCCGACCT TTCCTTTCAA CTTACCGTTG
GCGGAATGGG CACCGGAGTG GTTTAAACCT ACCGGAGACT GCGGTTATGA CGCGCCTATC
GTCCCTGATG GCGTAACGCT CAGTAGCGTA CAGCAGTGGT TTGTCGATCT CTACCAGCAG
TCCGAAGGCT GGTATCTGCT TCCGCCCTGG CACTTTATGA ACATGGCGCA GGCATGTATG
TTGGCCTTTG GGTTGTGCCT GATTCTGCTG CTGGTGATGA GCGGCGCCTG GGCATTGAAA
CTGGCCAGAG GCAAATAA
 
Protein sequence
MDFIKGLWRD LRARPVDTLV RWQEQRFLWL LMAIAMGGLI ILAHSFFQIY LYMAPCEQCV 
YIRYAMFVMV IGGVIAAINP KNIVLKLIGC IAAFYGSIMG IKFSIKLNGI HHAVHNADPD
SLFGVQGCST DPTFPFNLPL AEWAPEWFKP TGDCGYDAPI VPDGVTLSSV QQWFVDLYQQ
SEGWYLLPPW HFMNMAQACM LAFGLCLILL LVMSGAWALK LARGK