| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3507 |
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| Symbol | exbD |
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| ID | 6875077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3366628 |
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| End bp | 3367053 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642786499 |
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| Product | biopolymer transport protein ExbD |
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| Protein accession | YP_002217136 |
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| Protein GI | 198243033 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGC GTCTTAACGA GAACCTGGAT GACAACGGCG AAATGCATGA AATCAACGTG
ACGCCGTTTA TCGATGTCAT GTTGGTTCTG CTGATTATCT TTATGGTGGC TGCGCCGCTG
GCGACGGTGG ACGTCAAGGT GAATCTGCCC GCTTCTACCA GTACGCCACA GCCGCGTCCG
GAAAAACCGG TTTATCTGTC GGTGAAAGCG GATAACACCA TGTTTATCGG TAACGATCCG
GTGACGGATG ATACGATGAT TGCCGAGCTA ACGGCCCTGA CGGAAGGGAA AAAGGATACT
ACGATTTTCT TCCGTGCGGA TAAAACCGTA GAGTATGAAA CCCTGATGAA AGTGATGGAT
ATGCTGCATC AGGCGGGCTA TCTCAAGATT GGTCTGGTCG GCGAAGAGAC CGCGAAAGCG
AAATAA
|
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| Protein sequence | MAMRLNENLD DNGEMHEINV TPFIDVMLVL LIIFMVAAPL ATVDVKVNLP ASTSTPQPRP
EKPVYLSVKA DNTMFIGNDP VTDDTMIAEL TALTEGKKDT TIFFRADKTV EYETLMKVMD
MLHQAGYLKI GLVGEETAKA K
|
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