Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3479 |
Symbol | exuT |
ID | 6871763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3341478 |
End bp | 3342782 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786473 |
Product | hexuronate transporter |
Protein accession | YP_002217110 |
Protein GI | 198243543 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.474263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATGA CAAAATTAAG ATGGTGGATT ATCGGCCTGG TCTGCGTAGG GACCATCGTA AACTACCTGT CCCGTAGCTC GCTTAGCGTT GCGGCGCCAG CGATGATGAA AGAACTCCAT TTTGATGAGC AACAATATTC CTGGGTGGTG AGCGCCTTCC AGCTTTGTTA CACCATTGCG CAGCCGATCA CCGGCTATTT GATGGATGTC ATCGGACTGA AAATCGGCTT CTTTATCTTT GCCTTGTTAT GGTCGCTGAT CAACATGGCG CACGCGCTGG CCGGCGGCTG GATAAGTCTG GCATTTCTGC GTGGTCTGAT GGGGCTAACC GAAGCGTCAG CGATTCCGGC CGGGATTAAA GCCAGCGCCG AATGGTTCCC GACGAAAGAA CGCGGTATTG CGGGGGGACT GTTTAATATC GGTACTTCGA TTGGCGCGAT GCTGGCGCCG CCGCTGGTGG TCTGGGCGAT GCTGACCTTT GCTGATCGCG GCATCGGTAC TGAAATGGCG TTTGTGATTA CCGGTGGGAT CGGCGTGCTG TTCGCCATCA CCTGGTTCCT GATTTATAAC TCGCCAAATA AACACCCGTG GATCACCCAC AAAGAGCTGC GTTATATCGA AGACGGCCAG GAAAGCTATC TCCAGGACGA TAATAAAAAA CCGGCCGTTA AAGAGATCGT TAAAAAGCGT AACTTCTGGG CGTTGGCGAT TACCCGTTTT CTGGCTGACC CGGCATGGGG AACGCTGAGT TTCTGGATGC CGCTGTATCT GATTAACGTG ATGCATCTGC CGTTAAAAGA GATCGCCATG TTTGCCTGGC TGCCGTTCCT GGCGGCGGAC TTTGGCTGCG TTGCAGGCGG TTTCCTGGCG AAGTTCTTCA TGGAAAAGAT GCACATGACC ACGATCAATG CGCGTCGTTG TAGCTTTACC ATCGGCGCTG TTTTGATGAT TTCGATCGGT TTTGTCAGCA TTACGACTAA CCCGTATGTC GCCATTGCAT TGATGAGTAT TGGCGGTTTT GCGCACCAGA CGCTGTCTAC CGTCGTGATT ACCATGAGCG CTGACCTGTT CAAGAAAAAT GAGGTCGCGA CGGTTGCCGG TCTGGCAGGA TCTGCGGCAT GGATGGGACA GTTAAGCTTC AACCTGTTTA TGGGGGCATT GGTCGCTATT ATCGGTTACG GCCCGTTCTT CATTGCACTC AGTCTGTTCG ATATTATCGG CGCCATCATC CTGTGGGTAC TGATTAAAGA TCCAGAAAAG CACCACCCGC CAATGACGGA ACAGCCGCTG GCGTCTCACC GCTAA
|
Protein sequence | MKMTKLRWWI IGLVCVGTIV NYLSRSSLSV AAPAMMKELH FDEQQYSWVV SAFQLCYTIA QPITGYLMDV IGLKIGFFIF ALLWSLINMA HALAGGWISL AFLRGLMGLT EASAIPAGIK ASAEWFPTKE RGIAGGLFNI GTSIGAMLAP PLVVWAMLTF ADRGIGTEMA FVITGGIGVL FAITWFLIYN SPNKHPWITH KELRYIEDGQ ESYLQDDNKK PAVKEIVKKR NFWALAITRF LADPAWGTLS FWMPLYLINV MHLPLKEIAM FAWLPFLAAD FGCVAGGFLA KFFMEKMHMT TINARRCSFT IGAVLMISIG FVSITTNPYV AIALMSIGGF AHQTLSTVVI TMSADLFKKN EVATVAGLAG SAAWMGQLSF NLFMGALVAI IGYGPFFIAL SLFDIIGAII LWVLIKDPEK HHPPMTEQPL ASHR
|
| |