Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3452 |
Symbol | trmB |
ID | 6872164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3314872 |
End bp | 3315639 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642786446 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_002217084 |
Protein GI | 198244485 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.490215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATAATG CCCGTTTTCA GAACTCAAAC ACAGCAGACT ACACTTTTAT GAAAAACGAC GTCATTTCAC CGGAATTTGA TGAAAACGGT CGCCCGCTGC GCCGTATTCG TAGTTTTGTT CGTCGCCAGG GGCGACTGAC AAAGGGGCAA GAACACGCGC TGGAAAACTA CTGGCCGGTG ATGGGCGTCG AGTTCAGCGA AGCGCCGGTA GATTTCGCCA CGTTGTTTGG TCGCGAAGCG CCGGTGACGC TGGAGATTGG TTTTGGCATG GGGGCGTCTC TCGTGGCGAT GGCGAAAGCG CGCCCGGAGC AGAATTTCCT CGGCATTGAA GTGCATTCAC CCGGTGTCGG CGCGTGTCTG GCATCCGCTC ATGAAGAGGG CGTTGAAAAC CTGCGCGTCA TGTGCCACGA CGCGGTAGAA GTGTTGCATA AAATGATTCC TGACAATTCT TTATCGATGG TTCAGCTCTT TTTCCCTGAC CCGTGGCATA AAGCGCGTCA TAATAAACGC CGTATCGTTC AGGTGCCGTT TGCTGAACTG GTATTGAGCA AGCTGAAATT GGGCGGCGTT TTCCATATGG CGACCGACTG GGAAGCGTAT GCGGAACACA TGCTTGAAGT CATGTCTTCT ATCGACGGGT ACAAAAATCT GTCAGAGAGC AATGATTATG TACCGCGCCC GGAATCGCGC CCGGTAACGA AATTTGAACA ACGTGGCCAT CGTCTTGGTC ATGGCGTATG GGACTTAATG TTCGAGAGGG TGAAATAA
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Protein sequence | MDNARFQNSN TADYTFMKND VISPEFDENG RPLRRIRSFV RRQGRLTKGQ EHALENYWPV MGVEFSEAPV DFATLFGREA PVTLEIGFGM GASLVAMAKA RPEQNFLGIE VHSPGVGACL ASAHEEGVEN LRVMCHDAVE VLHKMIPDNS LSMVQLFFPD PWHKARHNKR RIVQVPFAEL VLSKLKLGGV FHMATDWEAY AEHMLEVMSS IDGYKNLSES NDYVPRPESR PVTKFEQRGH RLGHGVWDLM FERVK
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