| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3409 |
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| Symbol | |
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| ID | 6872516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3275511 |
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| End bp | 3276371 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642786407 |
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| Product | mechanosensitive channel MscS |
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| Protein accession | YP_002217045 |
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| Protein GI | 198242038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.427229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.109816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATT TGAATGTTGT CGACAGCATA AATGGTGCGG GCACCTGGCT GGTACGCAAC
CAGGCGTTAT TGCTCAGCTA TGCTGTGAAT ATTGTTGCGG CTATCGCTAT TATCATCATC
GGCTTGATTG TAGCGCGCGT GATTTCCAAT ACGGTAAATC GTCTGATGCG TGCGCGTCAT
ATTGATGCGA CAGTGGCCGA CTTTCTTTCT GCGCTGGTGC GCTATGGGGT TATCGCTTTT
ACGCTGATTG CGGCTCTGGG TCGCGTGGGG GTTCAAACCG CCTCGGTTAT TGCCGTACTG
GGCGCCGCTG GTTTAGCCGT TGGCCTGGCA TTACAGGGAT CGCTTTCTAA CCTTGCGGCT
GGGGTATTGC TGGTTATGTT CCGTCCGTTC CGCGCCGGTG AGTATGTCGA TTTAGGCGGC
GTTGCCGGTA CGGTACTTAA CGTGCAAATC TTTTCCACGA CAATGCGCGC GGTAGACGGC
AAAATTATTG TGATTCCGAA TGGCAAAATT ATCGCGGGAA ATATCATCAA CTATTCTCGT
GAGCCGGTTC GCCGCAACGA ATTCATTATT GGGGTGGCCT ACGATTCGGA TATCGATCAG
GTGAAACAGC TGCTCACGAC GATTATCGAG TCCGACGATC GTATTTTAAA AGATCGCGAA
ATGACGGTGC GTTTGAATGA GCTGGGCGCC TCATCAATTA ATTTTGTGGT GCGTGTCTGG
AGTAAAAGCA GCGACCTGCA AAATGTCTAC TGGGACGTGC TGGAACGTAT TAAACGTGAA
TTCGACGCCG CTGGTATTAG CTTCCCGTAC CCGCAGATGG ACGTCAATTT TAAACGCGTG
AAAGATAACG CCGCGGAGTA A
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| Protein sequence | MEDLNVVDSI NGAGTWLVRN QALLLSYAVN IVAAIAIIII GLIVARVISN TVNRLMRARH
IDATVADFLS ALVRYGVIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA
GVLLVMFRPF RAGEYVDLGG VAGTVLNVQI FSTTMRAVDG KIIVIPNGKI IAGNIINYSR
EPVRRNEFII GVAYDSDIDQ VKQLLTTIIE SDDRILKDRE MTVRLNELGA SSINFVVRVW
SKSSDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KDNAAE
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