Gene SeD_A3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3336 
Symboltas 
ID6871857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3213297 
End bp3214337 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content55% 
IMG OID642786343 
Productputative aldo-keto reductase 
Protein accessionYP_002216982 
Protein GI198244370 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.697041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0101445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATC ACCGTATACC CCACAGCTCG CTCGAAGTAA GTACGCTAGG GCTGGGCACA 
ATGACATTTG GTGAACAAAA CAGCGAAGCC GACGCTCACG CACAGCTCGA CTATGCCATC
GCAAATGGCA TTAACCTTAT CGACGCCGCC GAGATGTATC CGGTACCGCC GCGCCCGGAA
ACACAAGGGC TGACGGAGTC CTATATCGGT AACTGGCTCG CCAAACGCGG CAACCGTGAA
AAACTGATCA TCGCCAGCAA AGTTAGCGGA CCGGCACGTA ATAATGATCA AGGCATCCGG
CCTCATCAGG CGCTGGATCG TAAAAATATT CGCGAAGCGC TACACGACAG TTTGACCCGA
TTGCAGACCG ACTATCTGGA TTTGTATCAG GTGCACTGGC CGCAGCGCCC CACTAACTGC
TTCGGTAAAC TCGGCTATAA CTGGACGGAC TCCACGCCAG TAGTAAGTCT GCTGGAGACG
TTAGACGCGC TAAGTGAGTT TCAGCGAGCG GGTAAGATTC GTTATATTGG CGTTTCAAAT
GAGACAGCGT TTGGCGTTAT GCGCTATCTG CATCTGGCGG AAAAACATGA CCTGCCGCGT
ATTGTCACGA TCCAGAACCC CTATAGCCTG TTAAACCGCA GCTACGAGGT CGGGCTGGCG
GAAGTCAGCC AGTATGAAGG TGTTGAATTG CTCGCCTATT CCTGTCTGGC GTTTGGCACA
TTAACCGGTA AATACCTGAA CGGGGCCAAA CCCGCAGGCG CGCGGAATAC CTTGTTCAGC
CGCTTCACAC GTTACAGCGG CGAACAGGCG CAAAAAGCCG TTGCCGCCTA CGTCGATATC
GCGAAGCGTC ACAATCTTGA TCCGGCGCAG ATGGCGCTGG CCTTTGTTCG CCGCCAGCCG
TTTGTCGCCA GTACGTTACT GGGCGCAACC ACGATGGCGC AGCTCAAGAC GAATGTGGAA
AGTCTGCATC TGACGTTAAG CGAAGAGGTT CTGGCGGAGA TTGAGGCGGC GCATCAGGTT
TATACCTATC CGGCGCCGTG A
 
Protein sequence
MHYHRIPHSS LEVSTLGLGT MTFGEQNSEA DAHAQLDYAI ANGINLIDAA EMYPVPPRPE 
TQGLTESYIG NWLAKRGNRE KLIIASKVSG PARNNDQGIR PHQALDRKNI REALHDSLTR
LQTDYLDLYQ VHWPQRPTNC FGKLGYNWTD STPVVSLLET LDALSEFQRA GKIRYIGVSN
ETAFGVMRYL HLAEKHDLPR IVTIQNPYSL LNRSYEVGLA EVSQYEGVEL LAYSCLAFGT
LTGKYLNGAK PAGARNTLFS RFTRYSGEQA QKAVAAYVDI AKRHNLDPAQ MALAFVRRQP
FVASTLLGAT TMAQLKTNVE SLHLTLSEEV LAEIEAAHQV YTYPAP