Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3305 |
Symbol | |
ID | 6874626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3180512 |
End bp | 3181612 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786315 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_002216956 |
Protein GI | 198245568 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.571863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG TTGTATTGCT CTGCCGTCCG GGGTTTGAAA AAGAGTGCGC TGCAGAAATT ACCGATAAAG CGGGAAAACG GGAAATATTT GGTTTTGCAC GCGTAAAAGA GAACGCAGGC TATGTCATTT ATGAATGCTA CCAGCCGGAA GATGGCGAAA AGCTGATTTC AGAGCTGCCG TTCAGTTCGC TGATTTTCGC CCGCCAGTGG TTTGTGGTGG GTGAACTGCT GCAACATTTA CCGCCGGAAG ACAGAATTAC GCCGATTGTC GGCATGTTGC AGGGCGTAGT GGAAAAGGGC GGCGAGCTGC GAGTTGAAAT CGCCGACACC AATGAAAGTA AAGAATTGAT GAAGTTCTGC CGCAAATTTA CGGTGCCGCT GCGCGCGGCT TTGCGTGATG CGGGCGTATT GACGAATTAT GAAACGCCGA AGCGTCCGGT CGTTCATGTC TTTTTTATCG CGCCAGGATG CTGCTATACC GGTTATTCGT TCGCGCATAA CAATTCACCG TTTTATATGG GCATCCCGCG TTTGAAGTTT CCGTCTGATG CGCCGAGCCG CTCAACGCTG AAACTGGAAG AGGCGCTCCA CGTTTTCATC CCGGAAGATG AGTGGGATGA ACGTCTGGCG AACGGCATGT ATGCGGTGGA TTTGGGCGCC TGTCCCGGCG GATGGACGTA CCAGTTAGTG AAGCGCAATA TGTGGGTTTA CTCCGTAGAT AACGGCCCGA TGGCGCAAAG CCTGATGGAC ACCGGACAGG TGACCTGGTT GCGTGAGGAT GGCTTCAGGT ACCGTCCGAA CCGGAATAAT ATTTCATGGA TGGTCTGCGA TATGGTGGAG AAGCCGGCCA AAGTCACCGC GTTAATGGCG CAGTGGCTGG TGAACGGCTG GTGCCGGGAG ACGATTTTTA ACCTTAAACT GCCGATGAAA AAACGCTATG AAGAGGTATC GCATAACCTG GCGTATCTTC AGGCGCAGTT GGATGAGCAT GGCGTTAATG CGCAGATCCA GGCGCGTCAG CTTTATCACG ATCGCGAAGA AGTGACGGTA CACGTGCGTC GGTTGTGGGC GGCTGTTGGC GGGCGTCGCG ACGAGCGATA A
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Protein sequence | MNKVVLLCRP GFEKECAAEI TDKAGKREIF GFARVKENAG YVIYECYQPE DGEKLISELP FSSLIFARQW FVVGELLQHL PPEDRITPIV GMLQGVVEKG GELRVEIADT NESKELMKFC RKFTVPLRAA LRDAGVLTNY ETPKRPVVHV FFIAPGCCYT GYSFAHNNSP FYMGIPRLKF PSDAPSRSTL KLEEALHVFI PEDEWDERLA NGMYAVDLGA CPGGWTYQLV KRNMWVYSVD NGPMAQSLMD TGQVTWLRED GFRYRPNRNN ISWMVCDMVE KPAKVTALMA QWLVNGWCRE TIFNLKLPMK KRYEEVSHNL AYLQAQLDEH GVNAQIQARQ LYHDREEVTV HVRRLWAAVG GRRDER
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