Gene SeD_A3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3305 
Symbol 
ID6874626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3180512 
End bp3181612 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content53% 
IMG OID642786315 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_002216956 
Protein GI198245568 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.571863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TTGTATTGCT CTGCCGTCCG GGGTTTGAAA AAGAGTGCGC TGCAGAAATT 
ACCGATAAAG CGGGAAAACG GGAAATATTT GGTTTTGCAC GCGTAAAAGA GAACGCAGGC
TATGTCATTT ATGAATGCTA CCAGCCGGAA GATGGCGAAA AGCTGATTTC AGAGCTGCCG
TTCAGTTCGC TGATTTTCGC CCGCCAGTGG TTTGTGGTGG GTGAACTGCT GCAACATTTA
CCGCCGGAAG ACAGAATTAC GCCGATTGTC GGCATGTTGC AGGGCGTAGT GGAAAAGGGC
GGCGAGCTGC GAGTTGAAAT CGCCGACACC AATGAAAGTA AAGAATTGAT GAAGTTCTGC
CGCAAATTTA CGGTGCCGCT GCGCGCGGCT TTGCGTGATG CGGGCGTATT GACGAATTAT
GAAACGCCGA AGCGTCCGGT CGTTCATGTC TTTTTTATCG CGCCAGGATG CTGCTATACC
GGTTATTCGT TCGCGCATAA CAATTCACCG TTTTATATGG GCATCCCGCG TTTGAAGTTT
CCGTCTGATG CGCCGAGCCG CTCAACGCTG AAACTGGAAG AGGCGCTCCA CGTTTTCATC
CCGGAAGATG AGTGGGATGA ACGTCTGGCG AACGGCATGT ATGCGGTGGA TTTGGGCGCC
TGTCCCGGCG GATGGACGTA CCAGTTAGTG AAGCGCAATA TGTGGGTTTA CTCCGTAGAT
AACGGCCCGA TGGCGCAAAG CCTGATGGAC ACCGGACAGG TGACCTGGTT GCGTGAGGAT
GGCTTCAGGT ACCGTCCGAA CCGGAATAAT ATTTCATGGA TGGTCTGCGA TATGGTGGAG
AAGCCGGCCA AAGTCACCGC GTTAATGGCG CAGTGGCTGG TGAACGGCTG GTGCCGGGAG
ACGATTTTTA ACCTTAAACT GCCGATGAAA AAACGCTATG AAGAGGTATC GCATAACCTG
GCGTATCTTC AGGCGCAGTT GGATGAGCAT GGCGTTAATG CGCAGATCCA GGCGCGTCAG
CTTTATCACG ATCGCGAAGA AGTGACGGTA CACGTGCGTC GGTTGTGGGC GGCTGTTGGC
GGGCGTCGCG ACGAGCGATA A
 
Protein sequence
MNKVVLLCRP GFEKECAAEI TDKAGKREIF GFARVKENAG YVIYECYQPE DGEKLISELP 
FSSLIFARQW FVVGELLQHL PPEDRITPIV GMLQGVVEKG GELRVEIADT NESKELMKFC
RKFTVPLRAA LRDAGVLTNY ETPKRPVVHV FFIAPGCCYT GYSFAHNNSP FYMGIPRLKF
PSDAPSRSTL KLEEALHVFI PEDEWDERLA NGMYAVDLGA CPGGWTYQLV KRNMWVYSVD
NGPMAQSLMD TGQVTWLRED GFRYRPNRNN ISWMVCDMVE KPAKVTALMA QWLVNGWCRE
TIFNLKLPMK KRYEEVSHNL AYLQAQLDEH GVNAQIQARQ LYHDREEVTV HVRRLWAAVG
GRRDER