| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3280 |
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| Symbol | |
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| ID | 6875156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3158289 |
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| End bp | 3159629 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642786293 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_002216934 |
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| Protein GI | 198242129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.455755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACTC AATTTACGAC GCCTGTAGTG ACTGAAATGC AGGTTATCCC GGTTGCGGGT
CATGACAGTA TGCTGATGAA CCTGAGCGGC GCGCACGCCC CGTTCTTCAC GCGCAACATC
GTCATTATTA AAGATAACTC CGGCCATACC GGGGTCGGCG AGATTCCGGG CGGCGAAAAA
ATTCGCAAAA CGCTGGAAGA TGCGATCCCA CTGGTGGTGG GAAAAACGCT GGGTGAATAT
AAAAATGTCC TGACCGCCGT TCGCAACCAG TTTGCCGATC GCGATGCGGG CGGACGCGGT
TTACAAACAT TCGATCTCCG TACCACTATC CATGTGGTGA CGGGTATTGA AGCGGCAATG
CTTGACCTTT TGGGCCAACA CTTGGGCGTC AACGTCGCTT CGCTGTTAGG CGACGGTCAG
CAGCGCAGCG AAGTCGAAAT GCTGGGTTAT CTGTTCTTTG TCGGTAATCG CAAGGCTACG
CCGCTGCCGT ATCAGAGCCA GCCGGATGAG CAATGCGACT GGTATCGTCT GCGCCATGAA
GAGGCGATGA CGCCGGAAAC GGTAGTGCGT CTGGCGGAAG CCGCCTATGA AAAATACGGC
TTCAACGACT TCAAACTGAA AGGCGGCGTG CTGGCGGGCG AAGAAGAGGC CGAGTCAATC
GTGGCGCTGG CGAAACGTTT CCCACAAGCG CGCGTCACGC TCGATCCAAA CGGTGCCTGG
TCGCTGAACG AAGCGATCAG CATTGGTAAA TACCTGAAAG GTTCTCTGGC CTATGCAGAA
GATCCGTGCG GCGCGGAGCA GGGTTTTTCC GGACGTGAAG TGATGGCGGA ATTCCGTCGC
GCGACCGGAT TACCGACGGC CACCAATATG ATAGCGACCG ACTGGCGTCA AATGGGGCAT
ACGCTGTCGC TGCAATCCGT CGATATCCCG CTGGCGGACC CGCACTTCTG GACTATGCAA
GGCTCTGTAC GCGTGGCGCA AATGTGTCAT GAGTTCGGTC TGACCTGGGG CTCGCACTCT
AACAACCACT TTGATATTTC GTTGGCGATG TTTACCCATG TTGCCGCGGC GGCGCCGGGC
AAGATCACCG CGATCGATAC CCACTGGATC TGGCAGGAAG GCAACCAACG TCTGACTAAA
GAACCGTTTG AAATTAAAGG CGGCATGGTG CAAGTACCGA CCAAACCGGG TCTGGGCGTT
GAGCTCGATA TGGATCAGGT GATGAAAGCG CATGAGCTCT ATCAAAAACA TGGCTTAGGC
GCGCGTGACG ACGCGATGGG AATGCAGTAC TTAATTCCTG GCTGGACGTT TGATAATAAG
CGTCCTTGCA TGGTGCGTTA A
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| Protein sequence | MSTQFTTPVV TEMQVIPVAG HDSMLMNLSG AHAPFFTRNI VIIKDNSGHT GVGEIPGGEK
IRKTLEDAIP LVVGKTLGEY KNVLTAVRNQ FADRDAGGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQHLGV NVASLLGDGQ QRSEVEMLGY LFFVGNRKAT PLPYQSQPDE QCDWYRLRHE
EAMTPETVVR LAEAAYEKYG FNDFKLKGGV LAGEEEAESI VALAKRFPQA RVTLDPNGAW
SLNEAISIGK YLKGSLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TLSLQSVDIP LADPHFWTMQ GSVRVAQMCH EFGLTWGSHS NNHFDISLAM FTHVAAAAPG
KITAIDTHWI WQEGNQRLTK EPFEIKGGMV QVPTKPGLGV ELDMDQVMKA HELYQKHGLG
ARDDAMGMQY LIPGWTFDNK RPCMVR
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