Gene SeD_A3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3136 
SymbolalaS 
ID6874912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3015759 
End bp3018389 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content55% 
IMG OID642786157 
Productalanyl-tRNA synthetase 
Protein accessionYP_002216798 
Protein GI198245112 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0299814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.000378627 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAAGGG 
CATCAGGTAG TTGCCAGCAG TTCCCTGGTG CCTAACAATG ACCCCACTCT GTTGTTTACC
AATGCCGGGA TGAACCAGTT CAAGGATGTT TTCCTTGGGC TCGATAAACG TAATTATTCC
CGTGCAACCA CTTCCCAGCG TTGCGTACGC GCGGGGGGGA AACACAACGA TCTGGAAAAC
GTCGGATACA CTGCACGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC
GATTACTTCA AACACGACGC CATTCAGTTC GCATGGGAAT TACTGACCGG TGAAAACTGG
TTTGCTCTGC CAAAAGAGCG TTTATGGGTC ACCGTCTATG AAACCGACGA CGAAGCCTAT
GAGATCTGGG AAAAAGAAGT CGGCATCCCG CGCGAGCGTA TTATCCGTAT TGGCGACAAT
AAAGGCGCGC CATACGCATC GGATAACTTC TGGCAGATGG GCGATACCGG TCCCTGCGGT
CCGTGCACCG AAATCTTCTA CGATCATGGC GACCACATCT GGGGCGGCCC TCCGGGAAGC
CCGGAAGAAG ACGGCGATCG CTATATTGAG ATCTGGAACA TCGTCTTTAT GCAGTTCAAC
CGTCAGGCTG AAGGGACGAT GGAACCATTG CCGAAACCGT CTGTAGATAC CGGTATGGGG
CTGGAGCGTA TTGCCGCGGT ACTGCAGCAC GTTAACTCTA ACTATGACAT CGACCTGTTC
CGCACGTTGA TTGAAGCGGT AGCGAAAGTC ACCGGCGCTA CCGATCTGGG TAATAAATCG
CTGCGCGTTA TCGCCGACCA CATCCGTTCT TGCGCATTCC TGGTTGCCGA TGGCGTGCTG
CCGTCGAATG AAAACCGTGG TTATGTGCTG CGTCGCATTA TTCGTCGCGC GGTTCGTCAC
GGCAACATGC TGGGCGCGAA AGAGACCTTC TTCTACAAGC TGGTTGGGCC GCTGATTGAG
GTAATGGGCT CCGCAGGCGA AGAGTTGAAA CGTCAGCAGG CGCAGGTCGA GCAGGTTCTG
AAAACGGAAG AAGAGCAGTT CGCTCGTACG CTGGAGCGCG GTCTGGCGCT GCTGGATGAA
GAACTGGCGA AATTGCAGGG CGACACCCTG GACGGCGAAA CCGCTTTCCG TCTGTATGAT
ACTTATGGTT TCCCGGTCGA TCTAACGGCG GACGTCTGCC GTGAGCGCAA CATCAAAGTC
GACGAAGCCG GTTTTGAAGC CGCCATGGAA GAGCAACGCC GTCGCGCGCG CGAAGCTAGC
GGTTTTGGCG CGGACTACAA CGCGATGATC CGCGTTGATA GCGCTTCTGA ATTTAAAGGT
TATGACCATC TGGAACTGAA CGGCAAAGTG ACTGCGCTGT TTGTCGATGG TAAAGCGGTT
GAAGCGATTA ACGCGGGACA GGAAGCTGTT GTCGTGCTGG ATCAGACCCC ATTCTATGCG
GAATCAGGCG GTCAGGTTGG CGATAAAGGC GAGCTGAAAG GCGCTGGATT TACTTTCGCT
GTGGACGACA CGCAAAAATA TGGTCAGGCG ATTGGTCACC TCGGCAAATT GTCTGCGGGC
GCTCTGAAAG TGGGCGATGC GGTACAGGCT GACGTAGATG AAGCGCGCCG CGCACGTATC
CGTCTGAACC ACTCCGCCAC GCACCTGATG CACGCGGCGT TGCGCCAGGT GCTTGGGACA
CACGTTGCGC AGAAAGGTTC GCTGGTTAGC GATAAAGTGC TGCGCTTCGA CTTCTCGCAC
AATGAAGCGA TGAAGCCGTC GGAGATTCGT GAGGTTGAAG ATTTGGTGAA TGCGCAAATT
CGCCGCAACC TGCCGATTGA AACGAACATC ATGGATCTCG ACGCGGCGAA GGCGAAAGGG
GCCATGGCGC TGTTTGGCGA GAAATACGAC GAACGTGTAC GCGTTCTGAG CATGGGCGAT
TTTTCTACCG AACTGTGCGG CGGTACTCAC GCCAGTCGTA CCGGTGATAT CGGTCTATTC
CGTATTATCT CTGAGTCCGG CACCGCAGCG GGCATTCGTC GTATTGAGGC GGTAACCGGT
GAAGGCGCTA TGGCCACCGT TCATGCGCAA AGCGATCGCT TAAACGATAT TGCGCATCTG
CTGAAGGGCG ACAGCCAGAA TCTGGGCGAC AAAGTGCGTG CCGTGCTGGA ACGTACACGT
CAGCTGGAAA AAGAGTTGCA GCAGTTGAAG GACCAGGCCG CAGCGCAGGA GAGTGCAAAT
CTTTCCAGTA AAGCGGTCGA TCTCAACGGC GTGAAGCTCC TGGTTAGCGA GCTTGCTGGT
ATTGAGCCGA AAATGCTGCG AACCATGGTT GATGATCTGA AAAATCAACT GGGGTCTACC
GTTATCGTAC TGGCAACGGT TGTTGAAGGT AAGGTTTCTC TGATTGCGGG CGTGTCGAAG
GATGTGACCG ACCGGGTTAA AGCAGGGGAA TTGATTGGGA TGGTCGCTCA GCAGGTGGGC
GGTAAGGGTG GCGGTCGTCC GGACATGGCG CAAGCCGGTG GTACGGATGC GGCAGCTCTG
CCTGCAGCGT TAGCCAGTGT ACAAGGCTGG GTCAGCGCAA AATTGCAATA A
 
Protein sequence
MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYS 
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTGENW
FALPKERLWV TVYETDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG
PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQAEGTMEPL PKPSVDTGMG
LERIAAVLQH VNSNYDIDLF RTLIEAVAKV TGATDLGNKS LRVIADHIRS CAFLVADGVL
PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLIE VMGSAGEELK RQQAQVEQVL
KTEEEQFART LERGLALLDE ELAKLQGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV
DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV
EAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGAGFTFA VDDTQKYGQA IGHLGKLSAG
ALKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVAQKGSLVS DKVLRFDFSH
NEAMKPSEIR EVEDLVNAQI RRNLPIETNI MDLDAAKAKG AMALFGEKYD ERVRVLSMGD
FSTELCGGTH ASRTGDIGLF RIISESGTAA GIRRIEAVTG EGAMATVHAQ SDRLNDIAHL
LKGDSQNLGD KVRAVLERTR QLEKELQQLK DQAAAQESAN LSSKAVDLNG VKLLVSELAG
IEPKMLRTMV DDLKNQLGST VIVLATVVEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG
GKGGGRPDMA QAGGTDAAAL PAALASVQGW VSAKLQ