| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3121 |
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| Symbol | emrB |
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| ID | 6875447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3007628 |
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| End bp | 3009166 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642786145 |
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| Product | multidrug resistance protein B |
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| Protein accession | YP_002216791 |
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| Protein GI | 198243738 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0252817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAGCTCGTCA TCATGACGAT CGCGCTGTCG
CTGGCGACAT TCATGCAGGT GCTGGACTCC CCCATTGCCA ACGTGGCGAT TCCGACCATC
GCCGGGAACC TGGGTTCTTC CCTAAGCCAG GGGACATGGG TTATCACCTC TTTCGGGGTG
GCGAACGCTA TCTCGATTCC CTTAACCGGC TGGCTGGCGA AACGTTTTGG CGAAGTCAAA
CTGTTCATGT GGTCGACGGT CGCCTTTGCC GCGGCTTCCT GGGCCTGTGG CGTATCCAGC
AGTCTGAATA TGCTGATCTT CTTCCGCGTG GTGCAGGGCG TGGTCGCCGG GCCGCTGATT
CCGCTCTCGC AAAGCCTGTT GCTGAATAAC TATCCGCCTG CAAAGCGCTC CATTGCGCTG
GCGCTCTGGT CAATGACCGT CATTGTCGCG CCGATTTGCG GCCCGATTCT GGGGGGCTAT
ATCAGTGATA ATTACCACTG GGGATGGATT TTCTTCATCA ACGTGCCGAT TGGCATCGCC
GTCGTCCTGA TGACGTTACA CACGCTGCGC AGACGTGAAA CGCATACCGA ACGGCGACGT
ATTGACGCCG TCGGGCTGGC GTTACTGGTG ATTGGCATCG GCAGCCTGCA AATTATGCTC
GATCGCGGTA AAGAGCTGGA CTGGTTCTCC TCACAGGAAA TTATCATCCT GACCGTGGTC
GCCGTCATCG CCATCAGTTT CCTGATCGTC TGGGAACTGA CCGACGATCA CCCTATCGTC
GATCTTTCTC TTTTTAAATC GCGTAACTTC ACGATTGGCT GCTTGTGCAT CAGCCTTGCC
TATATGCTCT ATTTCGGCGC CATTGTTCTA CTGCCGCAGC TTTTGCAAGA GGTGTACGGC
TATACCGCAA CGTGGGCAGG TCTGGCGTCG GCGCCAGTCG GCATTATTCC GGTAATTTTG
TCGCCGATTA TCGGACGCTT CGCGCATAAA CTGGATATGC GCAGGCTGGT CACATTCAGC
TTCATTATGT ACGCCGTCTG TTTTTACTGG CGCGCCTGGA CGTTCGAACC GGGTATGGAT
TTCGGCGCTT CCGCATGGCC GCAGTTTATT CAGGGATTTG CCGTCGCCTG CTTCTTTATG
CCGCTGACCA CCATTACGCT CTCCGGGTTA CCGCCCGAAC GGCTGGCGGC GGCATCAAGC
CTGTCGAACT TCACGCGAAC GCTGGCGGGC TCCATTGGCA CCTCGATTAC CACCACTATG
TGGACCGATC GTGAGTCGCT ACACCATGCG CAGCTCACCG AGTCGGTTAC AGCGTATAAT
CCAAACGCTC AGGCTATGTA CGATAAACTG GAAGGCTTAG GGATGACGCA CCAACAGGCG
TCAGGCTGGA TAGCCCAGCA AATCACGAAT CAGGGGCTGA TTATTTCCGC CAACGAAATC
TTCTGGATGT CGGCGGGGAT CTTCCTGGTG CTGCTCGGCC TGGTGTGGTT CGCCAAACCG
CCCTTCGGTG CGGGCGGCGG CGGTGGCGGC GCGCACTAA
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| Protein sequence | MQQQKPLEGA QLVIMTIALS LATFMQVLDS PIANVAIPTI AGNLGSSLSQ GTWVITSFGV
ANAISIPLTG WLAKRFGEVK LFMWSTVAFA AASWACGVSS SLNMLIFFRV VQGVVAGPLI
PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGIA
VVLMTLHTLR RRETHTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV
AVIAISFLIV WELTDDHPIV DLSLFKSRNF TIGCLCISLA YMLYFGAIVL LPQLLQEVYG
YTATWAGLAS APVGIIPVIL SPIIGRFAHK LDMRRLVTFS FIMYAVCFYW RAWTFEPGMD
FGASAWPQFI QGFAVACFFM PLTTITLSGL PPERLAAASS LSNFTRTLAG SIGTSITTTM
WTDRESLHHA QLTESVTAYN PNAQAMYDKL EGLGMTHQQA SGWIAQQITN QGLIISANEI
FWMSAGIFLV LLGLVWFAKP PFGAGGGGGG AH
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