Gene SeD_A3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3102 
Symbol 
ID6875445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2991887 
End bp2992288 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID642786126 
ProductDNA binding protein, nucleoid-associated 
Protein accessionYP_002216772 
Protein GI198245376 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.669725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.844597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGA TGTTACAGAA CTTAAATAAT ATCCGCACGC TGCGCGCTAT GGCTCGCGAA 
TTCTCCATTG ACGTTCTTGA AGAAATGCTC GAAAAATTCA GGGTTGTCAC TAAAGAAAGA
CGCGAAGAAG AAGAATTGCA GCAACGCCAG CTTGCCGAGA AGCAGGAGAA AATTAATGCC
TTTCTGGAGC TGATGAAAGC AGACGGTATT AACCCGGAAG AGTTATTTGC CATGGATTCA
GCAATGCCGC GTTCTGCTAA AAAGCGCCAG CCGCGTCCGG CAAAATATCG TTTTACTGAT
TTCAATGGCG AAGAAAAAAC CTGGACCGGA CAAGGTCGTA CGCCTAAACC GATTGCCCAG
GCGCTGGCGG CGGGGAAATC TCTGGATGAT TTCTTAATCT AA
 
Protein sequence
MNLMLQNLNN IRTLRAMARE FSIDVLEEML EKFRVVTKER REEEELQQRQ LAEKQEKINA 
FLELMKADGI NPEELFAMDS AMPRSAKKRQ PRPAKYRFTD FNGEEKTWTG QGRTPKPIAQ
ALAAGKSLDD FLI