Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3075 |
Symbol | |
ID | 6873054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2968283 |
End bp | 2970457 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642786104 |
Product | outer membrane receptor FepA |
Protein accession | YP_002216750 |
Protein GI | 198245257 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.203578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA ATAAGTTCCT CTGGTTAATA ACCGTGGTTT CTACAGGGGT TAATAGTCCA TTATCAGCAG CAGAATCTAC AGACGACAAC GGCGAAACGA TGGTGGTTGA ATCCACTGCC GAGCAAGTAT TAAAGCAACA GCCGGGCGTT TCGATTATTA CTCGTGACGA TATTCAGAAG AATCCTCCCG TTAACGATCT TGCCGATATT ATTCGTAAGA TGCCTGGGGT TAATCTTACC GGCAATAGCG CCTCGGGGAC GCGCGGAAAT AACCGACAAA TTGATATTCG TGGTATGGGG CCGGAAAATA CCTTAGTGCT GATTGACGGC GTGCCGGTGA CGTCACGAAA TTCGGTTCGC TATAGCTGGC GCGGAGAACG CGACACCCGT GGCGATACGA ACTGGGTACC GCCGGAGATG GTAGAACGTA TTGAAGTGAT CCGTGGGCCC GCCGCCGCGC GCTATGGCTC CGGTGCCGCT GGCGGGGTGG TGAATATCAT CACCAAACGT CCGACTAACG ACTGGCATGG TTCGCTGTCG CTCTATACCA ACCAGCCGGA AAGCAGCAAA GAAGGTGACA CCCGGCGGGG TAACTTTAGC CTTAGCGGCC CGTTGGCTGG AGATACGTTG ACGATGCGTC TGTACGGTAA TCTCAACAGA ACCGATGCCG ACAGCTGGGA TATTAACTCC TCCGCCGGTA CCAAGAATGC CGCCGGACGG GAGGGGGTCA CCAATAAAGA TATTAATAGC GTCTTCTCAT GGAAAATGAC CCCGCAGCAA ATCCTTGATT TTGAAGCGGG ATACAGTCGG CAGGGGAATA TCTATGCCGG CGATACGCAA AACAGTACTT CGAACGCGGT TACTAAAAGT CTGGCGCAGT CCGGGCGGGA GACCAATCGC CTGTACCGGC AGAATTACGG TCTAACTCAT AACGGCATCT GGGACTGGGG GCAAAGCCGC CTGGGGTTCT ACTATGAAAA AACCGATAAT ACCCGCATGA ATGAGGGACT CTCCGGCGGC GGCGAGGGGC GCATTACCAA CGACCAGACG TTCACCACTA ACCGCCTGAT CTCGTATCGC ACCAGCGGCG AGGTGAATGT CCCGGTGATA TGGCTATTTG AGCAAACGCT CACCGTCGGC GCGGAGTGGA ACCGCGATGA GCTGAACGAT CCTTCCTCTA CCAGTCTGAC GGTTAAGGAT AGCAATATCG CCGGGATTCC CGGTTCGGCG GCTAACCGTA GCAGCAAAAA TAAATCGGAA ATCAGTGCGC TGTACGTTGA AGATAATATC GAACCCATGG CCGGTACCAA TATTATTCCG GGTCTGCGTT TTGACTATTT GAGCGAATCC GGGAGTAATT TTAGTCCCAG TCTTAACCTT TCCCAGGAGT TAGGTGAATA CGTCAAGGTG AAAGCCGGTA TTGCCCGGGC CTTTAAGGCA CCGAACTTGT ATCAAACCAG TGAGGGGTAT TTACTCTATT CGAAAGGCAA CGGTTGTCCA AAAGATATTA CGTCAGGCGG CTGTTACCTG GTCGGTAATA AGAACCTCGA TCCTGAAATT AGTATCAATA AAGAGATTGG GCTGGAATTT ACCGTAGACG ATTATCACGC AAGCGTAACG TATTTCCGTA ACGATTATCA GAATAAGATT GTCGCAGGTG ATCAGATTAT TGGCAGAAGC GCATCTGGCG CTTATGTATT GCAGTGGCAG AACGGCGGTA AAGCGCTGAT TGAAGGTATT GAAGCCAGCA TGGCTGTTCC GCTGATGCCG GACCGTCTGA ACTGGAATAC CAATGCGACT TATATGATCA CTTCTGAGCA AAAAGATACC GGTAATCCCT TATCGATAAT CCCGAAATAT ACGGTGAATA CCTTCCTCGA CTGGACTATC ACCAGCGCGC TCTCCGCTAA CGTCAACTGG ACGTTATACG GCAAGCAAAA ACCGCGAACA CATGCGGAGT CGCGTAGTGA AGAGACCAAA GGATTGTCCG GGAAAGCGCT GGGGGCTTAC TCACTGGTCG GCGCTAACGT TAACTACGAT ATCAATAAGA ACCTGCGTCT TAATGTCGGT ATCAGCAATA TCTTCGATAA ACAGATCTAT CGCTCCGCCG AAGGGGCAAA TACCTATAAC GAACCGGGTC GGGCTTATTA TGCCGGTGTG ACGGCCTCGT TTTGA
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Protein sequence | MKVNKFLWLI TVVSTGVNSP LSAAESTDDN GETMVVESTA EQVLKQQPGV SIITRDDIQK NPPVNDLADI IRKMPGVNLT GNSASGTRGN NRQIDIRGMG PENTLVLIDG VPVTSRNSVR YSWRGERDTR GDTNWVPPEM VERIEVIRGP AAARYGSGAA GGVVNIITKR PTNDWHGSLS LYTNQPESSK EGDTRRGNFS LSGPLAGDTL TMRLYGNLNR TDADSWDINS SAGTKNAAGR EGVTNKDINS VFSWKMTPQQ ILDFEAGYSR QGNIYAGDTQ NSTSNAVTKS LAQSGRETNR LYRQNYGLTH NGIWDWGQSR LGFYYEKTDN TRMNEGLSGG GEGRITNDQT FTTNRLISYR TSGEVNVPVI WLFEQTLTVG AEWNRDELND PSSTSLTVKD SNIAGIPGSA ANRSSKNKSE ISALYVEDNI EPMAGTNIIP GLRFDYLSES GSNFSPSLNL SQELGEYVKV KAGIARAFKA PNLYQTSEGY LLYSKGNGCP KDITSGGCYL VGNKNLDPEI SINKEIGLEF TVDDYHASVT YFRNDYQNKI VAGDQIIGRS ASGAYVLQWQ NGGKALIEGI EASMAVPLMP DRLNWNTNAT YMITSEQKDT GNPLSIIPKY TVNTFLDWTI TSALSANVNW TLYGKQKPRT HAESRSEETK GLSGKALGAY SLVGANVNYD INKNLRLNVG ISNIFDKQIY RSAEGANTYN EPGRAYYAGV TASF
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