Gene SeD_A3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3074 
Symbol 
ID6874785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2967312 
End bp2968241 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642786103 
Producthypothetical protein 
Protein accessionYP_002216749 
Protein GI198243714 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00155869 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGGTC GCCAGTACCA CAACAAGTGC TATCGCATGG CGCTATTTTT AGTGAGTTTT 
TGTTTTAGCG CGCTGAGTTA TGCGCAGCCG GATATGCAGC CATTAGGACC GAATATTGCT
GATAAAGGTT CGGGATATTA CCATTTTAGG GTCAATGACT TTCAATCTGC CGATGGCGCA
AGACATTACC GGGTATGGAC CGCTATTCCC AATAAAGCCG CCCCGCCGTC GGGTTATCCT
GTCTTATATA TGCTGGACGG CAACGCAGTG ATGGACAGAC TGCCGGAGAC GCTGCTCAAA
CAGCTGGCAG ACCACTCGCC GCCGGTGATT GTGGCGATTG GCTATCAGAC TAACCTGCCG
TTTGATCTTA ACGGCAGAGC TTATGACTAT ACGCCGGCGC CGGGAATCGA AGGCAGTGAA
AATAACCCGC GTTTTCATCG TAAGACCGGC GGCGGGCCAG CGTTCCGCCA GCTACTGGAG
AGACATATCG CGCCGCAGGT GGAACAAGGA ATAACCATCA ACCCCGAACG GCGCGGGGTA
TGGGGACATT CTTATGGCGG CCTGTTCGTT TTAGACTCCT GGCTGTCATC ATCCTTCTTT
CATATCTATT ACAGCGCCAG CCCGTCACTC AGCAGGGATA ACTTTGCCCT GTTGAATCGC
CTTACGGCAG TGAAGCCGTC GCCGTTCTGC CATAAAAAAC TCATCATAAT GGAAGGTTCA
GCGTCGAATG GGGATAGCAG GCAACGCCAG ATGGCCGAGC TCCTGCAAAA AGTTCAGGAG
ACCGTGAGAA CGCTTGAGAA CAACGGCGTT AACGCGGCCC TGCAGCATTA CCCGGGCCTG
GGCCACGGGC CCATGTTTAA CGCCTCTTTT CGCAGTGCAT TGCTGGATAT CAGTCGCGAA
CCGGCAAGCC AAAAACCACG CTGTCATTAA
 
Protein sequence
MYGRQYHNKC YRMALFLVSF CFSALSYAQP DMQPLGPNIA DKGSGYYHFR VNDFQSADGA 
RHYRVWTAIP NKAAPPSGYP VLYMLDGNAV MDRLPETLLK QLADHSPPVI VAIGYQTNLP
FDLNGRAYDY TPAPGIEGSE NNPRFHRKTG GGPAFRQLLE RHIAPQVEQG ITINPERRGV
WGHSYGGLFV LDSWLSSSFF HIYYSASPSL SRDNFALLNR LTAVKPSPFC HKKLIIMEGS
ASNGDSRQRQ MAELLQKVQE TVRTLENNGV NAALQHYPGL GHGPMFNASF RSALLDISRE
PASQKPRCH