| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3033 |
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| Symbol | |
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| ID | 6872102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2930573 |
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| End bp | 2932258 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642786063 |
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| Product | tail fiber domain-containing protein |
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| Protein accession | YP_002216709 |
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| Protein GI | 198243132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000290271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGCAA AATTTTATAC CCTGCTGACG GAGATCGGCG CGGCGAAACT GGCAAGCGCC
GCCGCGCTCG GTGTCCCGCT GAAAATTACC CATATGGCGG TGGGCGACGG TGGCGGTGTG
CTGCCCACAC CCAGCGCGCA ACAGACCGCG TTAGTTGCTG AGAAGCGTCG AGCAGCGCTG
AATATGCTGT ATATCGACCC GCAGAACAGC AGCCAGATTA TTGCTGAGCA AGTGATCCCG
GAAACTGAGG GGGGATGGTG GATTCGTGAG GTCGGCCTGT TTGATGAAAC CGGCGCACTG
ATCGCCGTGG GTAACAGCCC TGAGAGCTAC AAGCCGCAGC TGACAGAAGG GAGCGGACGT
ACGCAGACCG TGCGCATGGT ACTGATTACC AGCAGCACCG ATAACATCAC CCTGAAAATT
GATCCTGCAG TAGTACTGGC AACCCGTAAA TATGTAGATG ATAAGGCGCT GGAGCTGAAG
GTATATGTAG ACGACCTGAT GGCAAAGCAT CTTGCTGCAC CGGACCCGCA TTCACAGTAT
GCACCCAAAG AAAGTCCGAC GTTTACCGGG ACACCCAAAG CGCCAACGCC AGCGGCGCTG
GATACATTAA ATGAACTGGC TGCTGCGCTG GGGAATGATC CAAACTTTGC GACAACAGTG
ATGAATGCGC TGGCAGGAAA ACAACCTCTC GATACCACGC TGACGAATCT GAGTGGAAAA
GACAATGCAG GGATTCTCCA ATACCTCGGT TTAAAAGACG CACTTTTAAA AGGTGACGGG
CGATTCCTTG CGGGAACGTT TGTCAGTGAC GCAATTGACC GAACATCAAT TGGTGCCAGA
GCGGCTACAG GCTGTCAGTT TATGCGCGCA CATCAGGCAC CTGATGCGCC AGACCAGGTA
AGTTTCTGGC AAATTATTAC CCTTAGCGAG GTGGTAAGTC CGACCACTGT TGTGGATGTT
CTTGCAGTCA GTGGCAATAA CGTATTGTTT GGTCACGGAA CAGGAGCGGG TATTACCTCA
TGGCGTCAAG TGGCGATGCT GGAGGGGGGC GCCTTTACGG GGGGTATTTC TGCTCCAAAT
ATGCGTGGCG ATACCCTGGT TACGGTTGGG GATGGCACTG GTGGGATGGC TAAAGGTGAC
GTTGATGGTG CAGGTTTTAA TGGTAACAAT CTGAACATTA AGTCATGGAA TGGTATCGGA
TTTCAGAACT CAGAAGACCT GGCTATCCGG GCATATATCA GCACCCGACT CGGTGTTATC
GCAGCTGCTG AAAATTTGCA GGCCGGAAAT GCGATATTCA ACAAAAACGG CGATGTTTAC
GGCGATATAT GGGGCACAGG CAGCGGGCCT GGCTGGTTGA GTGCGTATAT TGCAGGCAGA
CCGTTACGAC AATACATCAC CATGGTCGGT GTGTACCAGA ACGACAAAAC AAAGCCATTT
ATGCTTCATG ATGATGGTTC TGGTGTATTC CTTGCTACAA CTGACATGCT AAGTGGGTAT
GTTCAGTCAA TTCGATTCGG TGCCGTTGAG CATGGAAACG TATATCGTTC GCCCGGATTT
GCAGACCAGT TAGGTTACGT CATTACAGGT GTTGAGAATG GAGACTCGAA CGAAACACCA
GACAGGATCC AACGACGCTT GTTACAGCTT AAAGTGAATG GTCAGTGGTA TACGGTGGGG
GCATAA
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| Protein sequence | MSAKFYTLLT EIGAAKLASA AALGVPLKIT HMAVGDGGGV LPTPSAQQTA LVAEKRRAAL
NMLYIDPQNS SQIIAEQVIP ETEGGWWIRE VGLFDETGAL IAVGNSPESY KPQLTEGSGR
TQTVRMVLIT SSTDNITLKI DPAVVLATRK YVDDKALELK VYVDDLMAKH LAAPDPHSQY
APKESPTFTG TPKAPTPAAL DTLNELAAAL GNDPNFATTV MNALAGKQPL DTTLTNLSGK
DNAGILQYLG LKDALLKGDG RFLAGTFVSD AIDRTSIGAR AATGCQFMRA HQAPDAPDQV
SFWQIITLSE VVSPTTVVDV LAVSGNNVLF GHGTGAGITS WRQVAMLEGG AFTGGISAPN
MRGDTLVTVG DGTGGMAKGD VDGAGFNGNN LNIKSWNGIG FQNSEDLAIR AYISTRLGVI
AAAENLQAGN AIFNKNGDVY GDIWGTGSGP GWLSAYIAGR PLRQYITMVG VYQNDKTKPF
MLHDDGSGVF LATTDMLSGY VQSIRFGAVE HGNVYRSPGF ADQLGYVITG VENGDSNETP
DRIQRRLLQL KVNGQWYTVG A
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