Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3010 |
Symbol | grpE |
ID | 6871499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2900475 |
End bp | 2901227 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642786044 |
Product | heat shock protein GrpE |
Protein accession | YP_002216690 |
Protein GI | 198246197 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.582953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCACA ATGCCGATAC ACTTGAAATG ATTATTCATT TTTCTGAGGT CCTTGTAGCG AAGATTGATG ACAATGTGAG TACTTCCCTT GAAACCCTGA ATCTGATCCC CATAATAAGC GAAGTTAGCG AGATGAATGC GAAAAAAAAC GCGGAGAAAT TCATGAGTAG TAAAGAACAG AAAACGCCTG AGGGGCAAGC CCCGGAAGAA ATTATCATGG ATCAGCACGA AGAGGTTGAG GCAGTTGAAC CAAACGATTC TGCTGAGCAG GTGGATCCGC GCGATGAAAA AATTGCGAAT CTGGAAGTTC AGCTTGCAGA AGCCCAGACT CGCGAACGCG ACACCGTGTT GCGCATCAAA GCGGAAATGG AAAACCTGCG CCGTCGTACT GAACAGGATA TCGAAAAAGC GCATAAATTC GCTCTCGAGA AGTTCGTCAA CGAATTGCTG CCGGTCATCG ATAGCCTGGA TCGCGCGCTG GAAGTCGCAG ACAAAGCCAA TCCGGATATG GCGGCAATGG TCGAAGGGAT TGAGCTGACG CTGAAGTCTA TGCTGGATGT GGTGCGTAAG TTCGGCGTGG AAGTGATTGC TGAGACCAAC GTGCCGCTGG ACCCGAACGT GCATCAGGCG ATTGCGATGG TGGAGTCGGA AGAGGTTCCG GCAGGCAATG TGCTGGGTAT TATGCAGAAA GGCTATACGC TGAACGGTCG TACCATTCGC GCGGCGATGG TGACTGTAGC GAAGGCGAAG TAA
|
Protein sequence | MPHNADTLEM IIHFSEVLVA KIDDNVSTSL ETLNLIPIIS EVSEMNAKKN AEKFMSSKEQ KTPEGQAPEE IIMDQHEEVE AVEPNDSAEQ VDPRDEKIAN LEVQLAEAQT RERDTVLRIK AEMENLRRRT EQDIEKAHKF ALEKFVNELL PVIDSLDRAL EVADKANPDM AAMVEGIELT LKSMLDVVRK FGVEVIAETN VPLDPNVHQA IAMVESEEVP AGNVLGIMQK GYTLNGRTIR AAMVTVAKAK
|
| |