Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2957 |
Symbol | recO |
ID | 6872833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2850726 |
End bp | 2851454 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642785996 |
Product | DNA repair protein RecO |
Protein accession | YP_002216646 |
Protein GI | 198245563 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.118345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGGGT GGCAGCGCGC ATTTGTCCTG CACAGTCGCC CCTGGAGCGA AACCAGCCTG ATGCTGGACG TCTTCACGGA AGAATCGGGG CGCGTGCGCC TTGTCGCCAA AGGCGCGCGA TCTAAACGTT CCAATCTGAA AGGCGTGTTG CAGCCTTTTA CGCCGTTATT GCTACGCTAC AGCGGACGCG GCGAGGTGAA AACCCTGCGC AGTGCCGAGG CAGTTTCTTT GGCGCTGCCG TTAAGCGGTA TTACGCTCTA TAGCGGCCTG TACATCAACG AACTCCTCTC TCGCGTACTG GAATATGAAA CGCGCTTCTC CGAACTCTTT TTTGATTATC TGAACTGTAT TCAGGCGCTG GCGGGAACCA CCGGCTCGCC TGAACCGGCG TTGCGACGTT TCGAACTGGC GTTGCTGGGT CATCTGGGGT ATGGCGTCAA TTTCACCCAC TGTGCAGGCA GCGGCGAACG GGTGGATGAC ACCATGACCT ACCGTTACCG CGAAGAAAAA GGCTTTTTCG CCAGCGTCGT CATCGATAAC AACACCTTTA CCGGACGGCA CCTGAAAGCG TTGGAGGAGC GGGAATTTCC GGATGTAGAT ACCCTGCGTG CCGCTAAACG CTTTACCCGT ATGGCATTAA AGCCGTATCT TGGGGGAAAA CCGTTAAAAA GCCGGGAGCT GTTCCGGCAA TTTATGCCCA AACGCACAGT AAAAATGAAG AAAGATTAA
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Protein sequence | MEGWQRAFVL HSRPWSETSL MLDVFTEESG RVRLVAKGAR SKRSNLKGVL QPFTPLLLRY SGRGEVKTLR SAEAVSLALP LSGITLYSGL YINELLSRVL EYETRFSELF FDYLNCIQAL AGTTGSPEPA LRRFELALLG HLGYGVNFTH CAGSGERVDD TMTYRYREEK GFFASVVIDN NTFTGRHLKA LEEREFPDVD TLRAAKRFTR MALKPYLGGK PLKSRELFRQ FMPKRTVKMK KD
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