Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2858 |
Symbol | |
ID | 6873011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2731688 |
End bp | 2732827 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642785909 |
Product | glycerate kinase |
Protein accession | YP_002216559 |
Protein GI | 198243037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.368112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG TTATTGCTCC TGATTCATTT AAAGAAAGTT TGTCCGCAAT GGCGGTCGCT GAGGCGATAG AAAAGGGGTT CCGCGAAATT TATCCTGACG CCGACTACGT TAAAGTGCCC ATGGCGGATG GCGGGGAAGG AACCGTACAA TCAATGGTGG AGGCCAGCGG CGGGCGTTAT ATTGACCAGT GGGTACAAGG CCCGCTAGGG CAACCGGTGG CCGCGCGCTG GGGAATGCTG GGCGATAGCG ATACCGCCGT GATTGAAATG GCGGCGGCAT CCGGGCTGCA TCACGTTTCG CCTGAATTGC GCAACCCGCT TAATACCACC AGCTACGGCA CCGGCGAGTT AATCGTCGCG GCGCTGGAGC GTGGCGTAAA GCGTATTATT CTGGGAATTG GCGGCAGCGC GACGAATGAC GGCGGCGCGG GGATGATGCA GGCGCTTGGC GTTATATTGC GCGATAAACA GGGGCGCTCG CTTTCTCCGG GCGGCGAGGC GCTGGCGGCG CTGGCCTCTA TCGATCTGTC CGGTTGTCAC CCATTGCTGC GTAAGGTATC GATAACCGTG GCGTGCGATG TCAACAATCC GCTGTGTGGT CCCCAGGGCG CATCGGCCAT TTTTGGCCCA CAAAAAGGGG CGACAGCGGA AATGGTGAAC ACCCTGGACG CGGCGCTGGA AAACTGGGGC AGACATATTT ATCAGGCTAC GGGGCGTGAG GTGATTAATG CTCCCGGCGC GGGCGCGGCA GGTGGAATGG GCGCCGCGCT TTTAGGATTG CTCAATGCGG AATTACGCGC CGGCGTAGAG ATTGTCGTGG AAACGCTACA GCTTGAGCAG GCGGTTAAAG ATGCCGATCT GGTGATTACC GGAGAAGGGC GGCTGGACAG CCAAAGTATT TGCGGCAAGA CGCCGATTGG CGTCGCCAGA GTGGCGAAGC GGTATCATAA ACCGGTTATC GCGCTCGCCG GTGGGCTGCA ACACGATCAT CACGTTGTGT ATCAACAGGG TATCGATGCA GCGCTGTCGA TTTTGTCGCA TATCGTTACG CTGCCGGAAG CCTTACACGA GGCGGAATAT AACCTGAGCC TGTCGGCGCG CAATGTGGCG GCGATATGGC GTCTGGCGCG GCAAGCCTGA
|
Protein sequence | MKIVIAPDSF KESLSAMAVA EAIEKGFREI YPDADYVKVP MADGGEGTVQ SMVEASGGRY IDQWVQGPLG QPVAARWGML GDSDTAVIEM AAASGLHHVS PELRNPLNTT SYGTGELIVA ALERGVKRII LGIGGSATND GGAGMMQALG VILRDKQGRS LSPGGEALAA LASIDLSGCH PLLRKVSITV ACDVNNPLCG PQGASAIFGP QKGATAEMVN TLDAALENWG RHIYQATGRE VINAPGAGAA GGMGAALLGL LNAELRAGVE IVVETLQLEQ AVKDADLVIT GEGRLDSQSI CGKTPIGVAR VAKRYHKPVI ALAGGLQHDH HVVYQQGIDA ALSILSHIVT LPEALHEAEY NLSLSARNVA AIWRLARQA
|
| |