Gene SeD_A2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2718 
Symbol 
ID6874431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2600917 
End bp2601576 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID642785783 
Producthypothetical protein 
Protein accessionYP_002216440 
Protein GI198245853 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.261998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TCTACTTTAT TATTGATTTT ATTCTGCACA TCGATGTGCA TCTGGCGGAG 
CTGGTCGCGG AGTACGGCGT CTGGGTGTAC GCTATTTTGT TTTTGATTCT GTTTTGTGAA 
ACCGGCCTGG TCGTCACGCC GTTCCTGCCG GGTGACTCGC TGCTGTTTGT CGCCGGGGCG 
CTGGCTTCGC TGGAAACCAA CGATCTCAAT GTGCATGTCA TGGTGGCGTT AATGCTGATC 
GCCGCAATTG TCGGCGATGC GGTAAATTAC ACGATTGGTC GACTGTTCGG CGAAAAACTG 
TTCAGTAATC CGAATTCGAA AATTTTCCGC CGCAGTTATC TGGATAAAAC CCACCAGTTT 
TATGAAAAAC ACGGCGGTAA AACTATCATT CTCGCTCGCT TCGTGCCGAT CGTCAGAACC 
TTTGCGCCGT TTGTGGCAGG GATGGGGCAC ATGTCCTATC GGCATTTTGC CGCCTATAAC 
GTCATCGGCG CGCTGCTGTG GGTGCTGCTC TTTACCTACG CCGGTTATTT CTTCGGTACG 
ATACCGTTGA TTCAGGATAA CCTTAAGCTG CTGATTGTGG GGATTATCGT GGTTTCGATA 
TTACCTGGCG TCATTGAGAT TGTCCGGCAT AAGCGCGCTG CGTCGCGTGC CGCAAAATAG
 
Protein sequence
MDLIYFIIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LASLETNDLN VHVMVALMLI AAIVGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHQF 
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALLWVLL FTYAGYFFGT 
IPLIQDNLKL LIVGIIVVSI LPGVIEIVRH KRAASRAAK