Gene SeD_A2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2657 
Symbolrnz 
ID6871650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2540812 
End bp2541729 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content56% 
IMG OID642785724 
Productribonuclease Z 
Protein accessionYP_002216381 
Protein GI198244294 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02649] ribonuclease BN
[TIGR02651] ribonuclease Z 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAA TTTTTTTAGG TACGTCCGCA GGCGTTCCCA CGCGCTCACG CAATGTAACG 
GCAATTTTAT TACATCTGCA ACATCCAACG CAGCCGGGAG TATGGCTTTT TGATTGCGGC
GAAGGGACAC AGCATCAAAT GCTTAATACC GCGTTTCATC CCGGTAAGCT TGAGCGCATT
TTTATCAGCC ATCTTCACGG CGATCATCTG TTTGGCCTGC CGGGTCTGCT ATGCAGCCGG
TCGATGGCGG GGAACCCCCA TCCGCTAACC GTATACGGGC CTCAAGGCGT GCGTGAGTTT
ATTGCAACCA CACTGCGTCT TAGCGGTTCA TGGACCGATT TTCCGTTGCA AATTGAAGAA
ATTAGCGCAG GCGATATTCT TGACGACGGT CTGCGTAAAG TGACCGCGTT CAGGCTGGAG
CATCCACTGG AGTGCTACGG ATATCGCGTT GTTGAACATG ACAAGCCTGG CGCGCTGAAT
GCCAGGGCGT TAAAAGCCGC AGGCGTTACG CCCGGCCCGC TGTTTCAGGC GTTGAAGGCA
GGAAAAACCG TCACGCTTGC CGATGGAAGG CAGATCAATG GCGCCGACTA CCTTGCTCCC
GCCGTGGCCG GGAAATCAGT GGCGATTTTC GGCGATACCG CGCCCTGCGA GGCCGCCCTC
GCGCTGGCGC AAGGTGTGGA TGTGATGGTC CATGAAACCA CGCTGGATGC GTCAATGGAG
GAGAAAGCCA ACGCTCGCGG ACACAGCTCC ACCCGTCAAA CCGCGACGCT GGCGCGGGAA
GCTGCCGTCG GTCGGCTGAT CATGACCCAT ATTAGCTCAC GCTATGACGA TAAAGGCTGT
CAGCGCTTAC TGGCGGAATG CCGCGCTATT TTCCCGGCGA CGGAGCTGGC TTACGATTTT
TCTGTTTTCC CGGTTTAG
 
Protein sequence
MELIFLGTSA GVPTRSRNVT AILLHLQHPT QPGVWLFDCG EGTQHQMLNT AFHPGKLERI 
FISHLHGDHL FGLPGLLCSR SMAGNPHPLT VYGPQGVREF IATTLRLSGS WTDFPLQIEE
ISAGDILDDG LRKVTAFRLE HPLECYGYRV VEHDKPGALN ARALKAAGVT PGPLFQALKA
GKTVTLADGR QINGADYLAP AVAGKSVAIF GDTAPCEAAL ALAQGVDVMV HETTLDASME
EKANARGHSS TRQTATLARE AAVGRLIMTH ISSRYDDKGC QRLLAECRAI FPATELAYDF
SVFPV