| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2629 |
|---|
| Symbol | |
|---|
| ID | 6872897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 2513006 |
|---|
| End bp | 2514265 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642785697 |
|---|
| Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
|---|
| Protein accession | YP_002216354 |
|---|
| Protein GI | 198241772 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.513641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.469709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG ATACGGTTAT TATGGGCGGC GGTCTCGCCG GTTTGCTATG CGGACTGCAA
CTCCAGCAGC ATGGATTACG CTGCGCCATC GTCACCCGCG GACAAAGCGC GCTGCATTTT
TCCTCCGGCT CGCTGGATCT ACTCAGCGCC CTGCCCGACG GCCAACCGGT GACCGACATT
ACCGCCGGGC TTGATGCGCT GCGCCGCCAG GCGCCTGAAC ATCCTTATTC GCGTTTAGGC
GCGCAAAAAG TCCTTACGCT GGCGCAACAG GCGCAAACGC TACTTAACGC CAGCGGCGCG
CAGTTATACG GCGACGTACA GCAGGCGCAC CAGCGTGTCA CGCCGCTTGG CACATTGCGT
TCAACCTGGC TTAGCTCGCC GGAAGTACCG GTCTGGCCGT TATCCGCACA GCGAATTTGC
GTCGTCGGCG TTAGCGGATT ACTGGATTTC CAGGCGCACC TTGCGGCAGC GTCGCTGCGC
CAACGCGACC TCAACGTGGA AACCGCAGAA ATCGACCTTC CGGAACTGGA CGTACTGCGT
GATAACCCGA CGGAATTTCG CGCGGTCAAT ATTGCGCGTC TGCTTGATAA CGAAGAAAAA
TGGCCACTGC TGTACGACGC GCTGTCGCCA ATAGCGACAA ACTGCGACAT GATCATCATG
CCCGCCTGTT TCGGGCTGGC GAACGATACG CTGTGGCGCT GGCTTAACGA ACGTCTGCCC
TGCGCGCTCA CGCTGCTGCC GACGCTGCCG CCATCGGTGC TCGGTATTCG TCTGCACAAT
CAGCTCCAGC GCCAGTTTGT CCGTCAGGGC GGCATCTGGA TGCCGGGCGA TGAAGTGAAG
AAAGTCACCT GCCGTCACGG TATCGTGAGC GAAATATGGA CCCGCAACCA TGCCGATATC
CCACTGCGCC CGCGTTTTGC CGTACTTGCC AGCGGTAGCT TCTTTAGTAG CGGTCTGGTT
GCCGAGCGCG AAGGGATCCG CGAACCTATT TTAGGGCTCG ACGTACAGCA AACGGCCACC
CGCGCCGAAT GGTATCAACA ACATTTCTTC GACCCACAGC CCTGGCAGCA GTTTGGCGTC
GTGACGGATG ACGCTTTCCG CCCCTCCCTT GCGGGCAACA CGGTAGAAAA TCTGTATGCA
ATAGGTTCTG TGCTGGCGGG ATTCGATCCT ATAGCTGAGG GATGCGGCGG CGGCGTCTGC
GCAGTCAGCG CCCTCCAGGC CGCGCACCAT ATCGCTGAGC GTGCAGGAGA ACAGCAATGA
|
|---|
| Protein sequence | MKFDTVIMGG GLAGLLCGLQ LQQHGLRCAI VTRGQSALHF SSGSLDLLSA LPDGQPVTDI
TAGLDALRRQ APEHPYSRLG AQKVLTLAQQ AQTLLNASGA QLYGDVQQAH QRVTPLGTLR
STWLSSPEVP VWPLSAQRIC VVGVSGLLDF QAHLAAASLR QRDLNVETAE IDLPELDVLR
DNPTEFRAVN IARLLDNEEK WPLLYDALSP IATNCDMIIM PACFGLANDT LWRWLNERLP
CALTLLPTLP PSVLGIRLHN QLQRQFVRQG GIWMPGDEVK KVTCRHGIVS EIWTRNHADI
PLRPRFAVLA SGSFFSSGLV AEREGIREPI LGLDVQQTAT RAEWYQQHFF DPQPWQQFGV
VTDDAFRPSL AGNTVENLYA IGSVLAGFDP IAEGCGGGVC AVSALQAAHH IAERAGEQQ
|
|---|
| |