Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2628 |
Symbol | glpA |
ID | 6874194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2511388 |
End bp | 2513016 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642785696 |
Product | sn-glycerol-3-phosphate dehydrogenase subunit A |
Protein accession | YP_002216353 |
Protein GI | 198243563 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | [TIGR03377] glycerol-3-phosphate dehydrogenase, anaerobic, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.710716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.455755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC GCGACTCGCA AGCAAGTGAC GTGATTATCA TTGGCGGTGG AGCAACAGGC GCAGGGATCG CCCGCGACTG CGCGCTGCGC GGTTTACGTG TCATTCTGGT GGAGCGGCAT GATATAGCGA CCGGCGCGAC CGGGCGTAAC CACGGGCTGC TGCACAGCGG CGCTCGTTAT GCGGTTACCG ACGCGGAATC CGCGCGCGAG TGCATTAGTG AAAACCAGAT TTTAAAACGG ATCGCCCGCC ATTGCGTCGA ACCGACGGAT GGTCTGTTTA TTACGTTGCC GGAAGATGAT CTTGCGTTTC AGGCCACCTT TATTCGCGCC TGTGAAGCGG CGGGCATTCG CGCTGAAGCC ATCGATCCGC AGCAGGCTCG CATCATCGAA CCTTCCGTTA ACCCTGCGCT CATCGGTGCG GTAAAAGTGC CGGATGGCAC CGTGGACCCT TTCCGCCTTA CCGCCGCCAA TATGCTGGAT GCCAGAGAAC ATGGCGCAAT CGTGTTAACG GCGCATGAAG TGACCGGGCT CATTCGTGAA GGCGCAACGG TCTGCGGCGT CCATGTGCGC AACCATCTCA CTGGCGAAAC TCAGACGCTT CACGCGCCGG TGGTGGTCAA TGCGGCAGGT ATCTGGGGGC AACGGATCGC CGAATACGCC GACCTGAGTA TTCGCATGTT CCCGGCGAAA GGCTCGCTGT TGATCATGGA CCATCGGATC AACCAGCATG TCATTAACCG CTGCCGGAAA CCATCGGATG CCGACATTCT GGTACCTGGC GATACGATTT CACTGATCGG CACCACCTCT ACCCATATTG ATTACAATGA GATAGACAGC AACCGCGTCA CCGCAGATGA AGTCGATATC CTGCTGCGTG AAGGGGAAAA ACTGGCCCCT GTCATGGCGA AGACGCGTAT TCTGCGCGCG TATTCCGGCG TCCGCCCGCT GGTGGCCAGC GATGACGATC CCAGCGGTCG TAACGTCAGC CGCGGTATTG TGTTGTTCGA CCACGCCGAA CGCGACGGGC TTGATGGCTT CATTACCATT ACCGGCGGGA AGCTAATGAC TTACCGCCTG ATGGCGGAAT GGGCGACCGA TGCCGTGTGC CGCAAGTTGG GCAATACTCG CCCCTGCATC ACGGCGGATA CGCCGTTGCC TGGCTCAAAA GAGTCTACAG AACATACGCT GAAACGCATT ATCTCGCTTC CCGCGCCGCT ACGCGGATCG GCGGTTTATC GGCATGGCGA TCGCACGCCG GGGTGGCTGA GTGAAGGCCG CCAACACCGT AGCCTGGTCT GTGAATGCGA GGCCGTCACG GCGGGGGAAG TGCAGTATGC CGTCGAAAAC TTAACCGTGA ATAGCCTGCT GGATCTGCGC CGTCGCACCC GCGTAGGGAT GGGCACTTGC CAGGGCGAAC TGTGCGCCTG CCGCGCGGCC GGGCTATTGC AGCGTTTTAA TGTAACGACC GCGGCGCAAT CTATTACGCA ACTCTCTGAA TTTCTGAATG AGCGCTGGAA AGGCGTACAA CCTGTCGCCT GGGGAGACGC GCTGCGCGAA AGCGAATTCA CGCGCTGGGT TTATCAGGGA TTATGCGGTC TGGAGAAGGA GCACCAGGAT GAAATTTGA
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Protein sequence | MKTRDSQASD VIIIGGGATG AGIARDCALR GLRVILVERH DIATGATGRN HGLLHSGARY AVTDAESARE CISENQILKR IARHCVEPTD GLFITLPEDD LAFQATFIRA CEAAGIRAEA IDPQQARIIE PSVNPALIGA VKVPDGTVDP FRLTAANMLD AREHGAIVLT AHEVTGLIRE GATVCGVHVR NHLTGETQTL HAPVVVNAAG IWGQRIAEYA DLSIRMFPAK GSLLIMDHRI NQHVINRCRK PSDADILVPG DTISLIGTTS THIDYNEIDS NRVTADEVDI LLREGEKLAP VMAKTRILRA YSGVRPLVAS DDDPSGRNVS RGIVLFDHAE RDGLDGFITI TGGKLMTYRL MAEWATDAVC RKLGNTRPCI TADTPLPGSK ESTEHTLKRI ISLPAPLRGS AVYRHGDRTP GWLSEGRQHR SLVCECEAVT AGEVQYAVEN LTVNSLLDLR RRTRVGMGTC QGELCACRAA GLLQRFNVTT AAQSITQLSE FLNERWKGVQ PVAWGDALRE SEFTRWVYQG LCGLEKEHQD EI
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