Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2627 |
Symbol | glpT |
ID | 6873606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2509757 |
End bp | 2511115 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642785695 |
Product | sn-glycerol-3-phosphate transporter |
Protein accession | YP_002216352 |
Protein GI | 198244785 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.588856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGTA TTTTTAAACC AGCGCCGCAT AAAGCGCGCT TGCCAGCGGC GGAGATTGAT CCGACCTATC GCCGATTACG CTGGCAGATT TTCCTGGGGA TATTCTTTGG CTATGCCGCG TATTATCTGG TGCGCAAGAA CTTTGCCCTC GCGATGCCCT ACCTGGTAGA ACAGGGTTTT TCACGCGGCG ATCTGGGTTT TGCGCTGTCC GGGATTTCCA TCGCTTATGG TTTTTCGAAA TTTATAATGG GTTCGGTGTC CGATCGCTCG AATCCGCGCG TTTTCCTGCC GGCAGGGTTG ATTCTGGCCG CAGCAGTCAT GTTGTTTATG GGCTTTGTAC CGTGGGCGAC ATCCAGCATC GCCGTGATGT TTGTGCTGTT GTTCCTTTGC GGCTGGTTCC AGGGGATGGG GTGGCCGCCG TGCGGACGTA CGATGGTTCA CTGGTGGTCG CAGAAAGAGC GCGGCGGCAT TGTGTCGGTC TGGAACTGCG CGCATAACGT CGGCGGCGGG ATCCCGCCAC TGCTGTTCCT GCTGGGGATG GCGTGGTTTA ACGACTGGAA AGCGGCGCTC TATATGCCAG CTTTTGGCGC GATTGTGGTG GCGCTGTTCG CTTTCGCAAT GATGCGCGAT ACGCCGCAAT CCTGCGGTCT GCCGCCTATC GAAGAGTATA AAAACGACTA TCCGGACGAC TACAACGAAA AAGCGGAAGA AGAGCTGACT GCGAAGCAGA TCTTCATGCA GTACGTACTG CCAAACAAAC TGTTGTGGTA CATCGCTATC GCCAACGTGT TCGTCTACCT GCTGCGCTAC GGTATCCTCG ACTGGTCGCC GACCTACCTG AAAGAAGTGA AGCATTTCGC ACTGGATAAA TCCTCCTGGG CATATTTCCT CTATGAATAC GCGGGTATTC CGGGCACGCT ACTGTGTGGC TGGATGTCGG ATAAAGTCTT CCGCGGCAAC CGTGGCGCGA CCGGCGTGTT CTTTATGACC CTGGTCACTA TTGCGACCAT CGTTTACTGG ATGAACCCGG CAGGGAACCC GAACGTTGAT ATGGCTTGTA TGATTATCAT CGGCTTCCTG ATCTACGGCC CGGTAATGTT GATCGGTCTG CACGCGCTGG AACTGGCGCC GAAAAAAGCG GCGGGTACGG CGGCGGGCTT TACCGGTCTG TTTGGTTATC TGGGCGGTTC TGTCGCTGCA AGCGCCATTG TGGGTTATAC CGTTGACTTC TTCGGTTGGG ATGGCGGCTT TATGGTGATG ATTGGCGGCA GCATTCTGGC GGTAATCCTG CTGGTGGTCG TGATGATTGG CGAAAAACGC CATCATGATG AGCTGCAGTT AAAACGCAAC GGAGGCTAA
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Protein sequence | MLSIFKPAPH KARLPAAEID PTYRRLRWQI FLGIFFGYAA YYLVRKNFAL AMPYLVEQGF SRGDLGFALS GISIAYGFSK FIMGSVSDRS NPRVFLPAGL ILAAAVMLFM GFVPWATSSI AVMFVLLFLC GWFQGMGWPP CGRTMVHWWS QKERGGIVSV WNCAHNVGGG IPPLLFLLGM AWFNDWKAAL YMPAFGAIVV ALFAFAMMRD TPQSCGLPPI EEYKNDYPDD YNEKAEEELT AKQIFMQYVL PNKLLWYIAI ANVFVYLLRY GILDWSPTYL KEVKHFALDK SSWAYFLYEY AGIPGTLLCG WMSDKVFRGN RGATGVFFMT LVTIATIVYW MNPAGNPNVD MACMIIIGFL IYGPVMLIGL HALELAPKKA AGTAAGFTGL FGYLGGSVAA SAIVGYTVDF FGWDGGFMVM IGGSILAVIL LVVVMIGEKR HHDELQLKRN GG
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