Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2610 |
Symbol | |
ID | 6871336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2486596 |
End bp | 2487732 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642785680 |
Product | outer membrane porin protein C |
Protein accession | YP_002216337 |
Protein GI | 198242855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.440954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA AAGTACTGTC CCTCCTGGTA CCAGCTCTGC TGGTGGCGGG CGCAGCGAAT GCGGCTGAAA TTTATAATAA AGACGGCAAC AAATTAGACC TGTTTGGTAA AGTTGATGGC CTGCACTACT TCTCTGACGA CAAAGGCAGC GACGGCGACC AGACCTACAT GCGTATCGGC TTCAAAGGCG AAACGCAGGT TAACGATCAA CTGACCGGTT ATGGCCAGTG GGAATATCAG ATTCAGGGCA ACCAGACTGA AGGCAGCAAC GACTCCTGGA CGCGTGTGGC GTTTGCGGGT CTGAAATTCG CTGACGCAGG TTCCTTCGAT TATGGTCGTA ACTACGGCGT AACCTATGAC GTGACCTCCT GGACCGACGT TCTGCCGGAG TTCGGCGGCG ACACCTACGG CGCTGACAAC TTTATGCAGC AGCGTGGTAA TGGCTATGCC ACCTACCGTA ACACCGACTT CTTCGGCCTG GTGGATGGTC TGGACTTCGC GTTGCAGTAT CAGGGCAAAA ACGGCAGCGT GAGCGGTGAA AACACTAACG GTCGCAGCCT GCTGAACCAG AACGGCGACG GTTACGGCGG ATCGCTGACC TATGCAATCG GCGAAGGCTT CTCTGTCGGT GGCGCTATCA CCACGTCTAA ACGTACTGCC GATCAGAATA ACACCGCTAA CGCTCGCCTG TATGGTAACG GCGATCGCGC CACGGTTTAC ACCGGCGGCC TGAAATACGA TGCGAACAAC ATCTATCTGG CAGCGCAGTA TTCTCAGACC TATAACGCAA CCCGTTTTGG TACCTCTAAC GGCAGCAACC CGTCCACCTC TTACGGTTTT GCCAACAAAG CGCAGAACTT TGAAGTGGTT GCTCAGTACC AGTTCGACTT TGGTCTGCGT CCGTCTGTGG CTTACCTGCA GTCTAAAGGT AAGGACATCA GCAACGGTTA CGGCGCCAGC TATGGCGACC AGGACATCGT AAAATACGTT GATGTCGGCG CGACTTACTA CTTCAACAAA AACATGTCCA CCTATGTTGA TTACAAAATC AACCTGCTGG ATAAAAACGA CTTTACCCGC GATGCGGGCA TCAACACCGA CGACATCGTA GCGCTGGGTC TGGTTTACCA GTTCTAA
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Protein sequence | MKVKVLSLLV PALLVAGAAN AAEIYNKDGN KLDLFGKVDG LHYFSDDKGS DGDQTYMRIG FKGETQVNDQ LTGYGQWEYQ IQGNQTEGSN DSWTRVAFAG LKFADAGSFD YGRNYGVTYD VTSWTDVLPE FGGDTYGADN FMQQRGNGYA TYRNTDFFGL VDGLDFALQY QGKNGSVSGE NTNGRSLLNQ NGDGYGGSLT YAIGEGFSVG GAITTSKRTA DQNNTANARL YGNGDRATVY TGGLKYDANN IYLAAQYSQT YNATRFGTSN GSNPSTSYGF ANKAQNFEVV AQYQFDFGLR PSVAYLQSKG KDISNGYGAS YGDQDIVKYV DVGATYYFNK NMSTYVDYKI NLLDKNDFTR DAGINTDDIV ALGLVYQF
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