Gene SeD_A2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2566 
Symbol 
ID6875279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2445130 
End bp2446686 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content52% 
IMG OID642785641 
Producthypothetical protein 
Protein accessionYP_002216299 
Protein GI198246093 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00233571 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTACAC GCGACTCCTC TTCCGGTCGG AAAATCCTGC TTACCTGTAT CATTACGGGG 
ATAGCGGCAG CATTACTTAT TGGTAGCCTG CAATTTTTCC TGTCGTGGCA TAAACGGGAT
GTTAAATACA ATACGCTCCT TTCTGATGTA CAACATTACC TGGCCAGCTA TTTCGCCGAC
CTGAAAGCCA CCACCGATAT TCTTCAGCCG TTGACGATCA ACACCTGTCA GCAGGTTGGC
GCAGAACTCA CCTCAAGAGC CGCTTTTAGC CTTAATGTCC GCGCCTTCTT ATTGATTAAA
GATAAAAAAG TGTTCTGCTC TTCCGCCACT GGCGCCATGA ATATGCCGCT TCAGCAACTG
GTACCGGATA TAGATATCCG CAAAGACGTT GCTATGGCGA TTCTGCCCGG CACGCCAATG
ATGCCCAACA AACCGACAAT GGTGATTTGG TATCGAAACC CATTATTAAA TGACAGCGGC
GTATTCACAT CGCTGAATAT TAACCTGACG CCCTACTTAC TCTATACCAC GCGCCAGGAT
GATTTTAACG GCATCGCGCT GATTGTCGGC AATACCGCGC TGTCGACCTT TTCTTCGCGT
CTGCTGACCG TCGCGGAGCT GCCGGGCACG CCTTCACGAC AGGCAACTAT CAACGGCCTG
CCGCTTAAAA TACAGCTTTA TGCCGATAGC TGGACCTACA ATGACTTGTG GTATGCGTTG
ATGCTGGGCT GCATTAGCGG CATCGTAGCG GGGTTTATCT GTTACTTTAT CTATGCCCTC
CGGACGCGAC CGGGCAAAGA GATTTTAACG GCGATCAAAC ACGAGCAGTT TTATGTGGTT
TATCAGCCCG TCGTCGATAC TCGTACGCTG AGCGTCACCG GGCTTGAAGT CTTACTGCGC
TGGCGTCACC CTACGGCAGG CGAGATTCCG CCGGATGCCT TTATCCACTA TGCCGAAGCG
CAGCAACTTA TCGTACCGTT AACGCAGCAT CTGTTCGAGC TGATCGCCCG CGACGCGCCC
ACGCTACAGA AGGTGATGCC CGTCGGTGCC AAATTTGGCA TTAACATCGC GCCGGAACAT
CTGCACAGCG ACAGTTTTAA AGAGGATATG CACCGGCTCA GGGACGCCCT GCCCGCGCAC
CATTTTCATA TCGTGCTGGA AATCACTGAA CGCGATATGC TCCAGCAGTA TGAAGCGGCC
AAACTGTTCG AATGGCTGCA TTCCGCCGGG TTTGAAATCG CTATAGATGA TTTCGGTACA
GGCCATAGCG CCCTGATTTA TCTGGAGCGA TTTACTTTAG ATTATCTGAA AATCGATCGC
GGCTTTATCC AGGCGATCGG TACGGAAACC GTCACGTCTC CGGTTCTGGA TACCGTGCTG
ACGCTCTCCA GACGCCTGAA TATGCTGACG GTGGCCGAGG GCGTTGAAAC GCCGGAGCAG
GCCCGTTGGC TACGCGATCA CGGTGTTAAT TACTTGCAGG GGTACTGGAT TAGCCGTCCT
TTACCCCTAA AAGATTTCGT GCTGTGGATG TCGGCGCCTT CCGTGCCTGA ATGGTAG
 
Protein sequence
MLTRDSSSGR KILLTCIITG IAAALLIGSL QFFLSWHKRD VKYNTLLSDV QHYLASYFAD 
LKATTDILQP LTINTCQQVG AELTSRAAFS LNVRAFLLIK DKKVFCSSAT GAMNMPLQQL
VPDIDIRKDV AMAILPGTPM MPNKPTMVIW YRNPLLNDSG VFTSLNINLT PYLLYTTRQD
DFNGIALIVG NTALSTFSSR LLTVAELPGT PSRQATINGL PLKIQLYADS WTYNDLWYAL
MLGCISGIVA GFICYFIYAL RTRPGKEILT AIKHEQFYVV YQPVVDTRTL SVTGLEVLLR
WRHPTAGEIP PDAFIHYAEA QQLIVPLTQH LFELIARDAP TLQKVMPVGA KFGINIAPEH
LHSDSFKEDM HRLRDALPAH HFHIVLEITE RDMLQQYEAA KLFEWLHSAG FEIAIDDFGT
GHSALIYLER FTLDYLKIDR GFIQAIGTET VTSPVLDTVL TLSRRLNMLT VAEGVETPEQ
ARWLRDHGVN YLQGYWISRP LPLKDFVLWM SAPSVPEW