| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2553 |
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| Symbol | |
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| ID | 6872682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2433185 |
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| End bp | 2434042 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642785628 |
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| Product | endonuclease IV |
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| Protein accession | YP_002216286 |
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| Protein GI | 198244000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.764772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.000695113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATACA TCGGAGCGCA CGTCAGCGCT GCTGGCGGTC TGGCTAACGC CCCTGCCCGC
GCGGCTGAAA TTGGCGCAAC GGCCTTTGCG CTTTTCACAA AAAACCAGCG TCAGTGGCGT
GCCGCCCCCC TTACTCCCCA GGTCATTGAT GACTTTAAAA TCGCCTGTGA AAAGTATCAT
TTCTCGGCGG CGCAAATTCT TCCCCACGAT AGTTACCTGA TTAATCTGGG CCATCCGGTC
AGTGAAGCGC TGGAAAAATC ACGCGATGCC TTTCTCGATG AAATGCAGCG CTGTGAACAA
CTCGGCTTAA CCTTGCTTAA TTTTCATCCC GGTAGCCATC TGATGCAGAT TGCACAGGAG
GATTGCCTGG CGCGGATCGC GGAATCCATC AATATTGCCC TCGCGCAGAC CGAGGGCGTT
ACGGCGGTTA TCGAAAATAC AGCCGGTCAG GGCAGTAATC TGGGGTTTGA GTTTGAACAG
TTAGCCGCCA TCATCGACGG CGTGGAAGAT AAGTCGCGCG TTGGCGTCTG TATCGATACC
TGCCATGCCT TTGCCGCCGG ATACGATCTG CGTACGCCAG AGGCGTGCGA AAAAACATTC
TCCGAATTCG GGAAAATTGT CGGATTTCAG TATTTGCGCG GAATGCACCT GAACGACGCC
AAAAGCGCCT TCGGTAGCCG CGTTGACCGC CATCACAGTC TGGGTGAAGG CAATATCGGC
CACGATGCGT TTCGTTGGAT TATGCAGGAT GGGCGTTTTG ACGGTATTCC GCTGATACTG
GAGACCATCA ATCCTGATAT CTGGGCGGAA GAGATTGCGT GGTTAAAAGC CCAGCAAATT
GCCGAAGCGA TGGCCTGA
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| Protein sequence | MKYIGAHVSA AGGLANAPAR AAEIGATAFA LFTKNQRQWR AAPLTPQVID DFKIACEKYH
FSAAQILPHD SYLINLGHPV SEALEKSRDA FLDEMQRCEQ LGLTLLNFHP GSHLMQIAQE
DCLARIAESI NIALAQTEGV TAVIENTAGQ GSNLGFEFEQ LAAIIDGVED KSRVGVCIDT
CHAFAAGYDL RTPEACEKTF SEFGKIVGFQ YLRGMHLNDA KSAFGSRVDR HHSLGEGNIG
HDAFRWIMQD GRFDGIPLIL ETINPDIWAE EIAWLKAQQI AEAMA
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