Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2548 |
Symbol | |
ID | 6874632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2427075 |
End bp | 2429027 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642785623 |
Product | colicin I receptor |
Protein accession | YP_002216281 |
Protein GI | 198245301 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.00911927 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGCAG TTACGTTGGC CTGGCCGGTT GCCGCGGCAA CGGATGATGG TGAAACTATG GTCGTTACCG CGTCCGCCAT CGAACAAAAT CTGAAAGATG CGCCAGCAAG TATCAGCGTC ATTACCCAGC AAGATTTACA GCGCAGGCCC GTGCAAAACC TGAAAGATGT CCTGAAAGAG GTGCCGGGCG TACAGCTCAC TAACGAAGGG GATAACCGTA AAGGCGTGAG TATTCGTGGT CTGGACAGCA GTTATACGCT GATCCTGATC GACGGTAAGC GCGTTAACTC CCGTAACGCG GTCTTCCGCC ATAATGATTT TGATCTGAAC TGGATACCGG TTGACGCTAT CGAACGCATT GAAGTGGTGC GTGGCCCCAT GTCCTCGCTG TATGGCTCCG ATGCGCTGGG CGGCGTGGTC AACATTATCA CCAAAAAAAT TGGTCAGAAA TGGCACGGCA GCGTCACGGT TGACTCCACT ATTCAGGAAC ATCGCGACCG TGGCGATACC TATAACGGTC AGTTCTTTAC CAGCGGTCCG CTGATCGACG GCGTGCTGGG AATGAAAGCC TACGGTAGCC TGGCGAAACG CGAAAAAGAC GAGCAGCAGA GTTCCGCCAC CACCGCTACG GGTGAAACGC CGCGCATTGA AGGATTTACC AGCCGGGATG GAAACGTCGA GTTTGCCTGG ACACCAAACG AAAATCATGA CGTTACCGCA GGCTACGGTT TTGATCGCCA GGACCGGGAC TCCGACTCGC TGGATAAAAA TCGTCTGGAA CGGCAAAACT ACGCGTTGAG CCATAACGGA CGTTGGGATC TCGGCAATAG CGAGCTCAAA TTCTACGGCG AAAAAGTGGA AAACAAAAAC CCCGGCAACA GTAGCCCTAT CACGTCAGAA AGCAATTCGA TTGACGGGAA ATACGTTCTG CCGTTAGCGT CTGTCAACCA GTTCCTCACC TTCGGCGGCG AATGGCGTCA CGATAAACTG AGCGATGCGG TGAACCTGAC CGGCGGTTCC AGTACTAAAA CCTCCGCCAG CCAGTATGCT CTGTTCCTTG AAGATGAGTG GCGCATCTTC GAACCGCTGG CGCTGACCAC CGGTATTCGT ATGGATGACC ATGAAACCTA TGGCGATCAC TGGAGCCCGC GTGCTTATCT GGTCTATAAC GCAACGGATA CCCTGACGGT GAAAGGTGGG TGGGCCACGG CCTTTAAAGC GCCGTCGCTA TTGCAATTAA GTCCGGACTG GGCGACCAAC TCCTGCCGTG GCGGATGCCG CATTATCGGT AGCCCGGATC TGAAACCTGA AACCAGTGAA AGCTGGGAGC TCGGCCTTTA TTACCGGGGC GAAGAAGGCA TACTGGAGGG CGTGGAAGCG AGCGTTACCA CGTTCCGTAA CGATGTGGAC AATCGCATCA GCATTAGCCG TACCCCTGAC GTTAACGCCG CGCCCGGCTA TTCCAACTTT GTCGGTTTCG AAACCAACAG TCGGGGACAG CGCGTTCCGG TCTTCCGTTA TTACAACGTG AATAAAGCGC GTATTCAGGG CGTGGAAACC GAGTTGAAAG TTCCGTTTAA CGAGGCGTGG AAACTGTCGT TGAATTACAC CTATAACGAC GGACGCGACG TCAGTAATGG CGGGAACAAG CCGCTTTCCG ATCTGCCGTT CCACACCGCG AACGGTACGC TGGACTGGAA ACCGGCGCAG CTCGAAGACT GGTCATTCTA CGTATCAGGG AATTATAACG GGCGTAAGCG GGCCGACAGC GCAACAGCGA AAACGCCGGG CGGGTATGTG GTCTGGGATA CCGGCGCGGC ATGGCAGGCG ACGAAAAACG TTAAACTGCG TGCGGGCGTT CTGAACGTGG GCGATAAAGA TCTCAAACGC GACGACTACG GTTATACCGA AGACGGACGT CGTTACTTTA TGGCGGTGGA TTACCGTTTC TGA
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Protein sequence | MSAVTLAWPV AAATDDGETM VVTASAIEQN LKDAPASISV ITQQDLQRRP VQNLKDVLKE VPGVQLTNEG DNRKGVSIRG LDSSYTLILI DGKRVNSRNA VFRHNDFDLN WIPVDAIERI EVVRGPMSSL YGSDALGGVV NIITKKIGQK WHGSVTVDST IQEHRDRGDT YNGQFFTSGP LIDGVLGMKA YGSLAKREKD EQQSSATTAT GETPRIEGFT SRDGNVEFAW TPNENHDVTA GYGFDRQDRD SDSLDKNRLE RQNYALSHNG RWDLGNSELK FYGEKVENKN PGNSSPITSE SNSIDGKYVL PLASVNQFLT FGGEWRHDKL SDAVNLTGGS STKTSASQYA LFLEDEWRIF EPLALTTGIR MDDHETYGDH WSPRAYLVYN ATDTLTVKGG WATAFKAPSL LQLSPDWATN SCRGGCRIIG SPDLKPETSE SWELGLYYRG EEGILEGVEA SVTTFRNDVD NRISISRTPD VNAAPGYSNF VGFETNSRGQ RVPVFRYYNV NKARIQGVET ELKVPFNEAW KLSLNYTYND GRDVSNGGNK PLSDLPFHTA NGTLDWKPAQ LEDWSFYVSG NYNGRKRADS ATAKTPGGYV VWDTGAAWQA TKNVKLRAGV LNVGDKDLKR DDYGYTEDGR RYFMAVDYRF
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