Gene SeD_A2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2516 
Symbol 
ID6871565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2397929 
End bp2398498 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID642785596 
Productinner membrane protein YohD 
Protein accessionYP_002216254 
Protein GI198245747 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA ACACGCTTAT TACGCATTAT GGCTATGCGG CGCTGGTTAT CGGCAGTATG 
GCCGAAGGTG AAACCGTTAC CCTGTTGGGG GGCGTCGCGG CGCATCAGGG ATTACTCAAG
TTTCCGCTGG TGGCGGCGGC CGTCGCGCTG GGAGGGATGA TGGGCGATCA GCTACTTTAC
CTGTTAGGAC GATGCTATGG CGGGAAGATC CTGCGTCGTT TCCCGCGTTA TCATACGAAG
ATTCGTCGCG CGCAGAAAAT GATCCAACGC CATCCGTATC TGTTTGTGAT CGGCACGCGT
TTTATGTATG GCTTCCGGGT GGTTGGCCCG CTGCTGATTG GCGCCAGCCG CCTGCCGCCT
AAAATTTTTC TGCCGCTGAA TATTGTAGGC GCGCTGATCT GGGCGCTGCT GTTTACCACG
CTGGGATATC TTGGCGGCGA GGTGATCGCG CCATGGCTGC ACGACCTCGA TCAGCATCTC
AGGCACGGGG TCTGGCTGAT TCTGGCCATC GTCCTGGTGG TGGGCGTGCG CTGGTGGCTG
AAAAGACGCG GCAAAGCGGA GGCCCGTTAA
 
Protein sequence
MDINTLITHY GYAALVIGSM AEGETVTLLG GVAAHQGLLK FPLVAAAVAL GGMMGDQLLY 
LLGRCYGGKI LRRFPRYHTK IRRAQKMIQR HPYLFVIGTR FMYGFRVVGP LLIGASRLPP
KIFLPLNIVG ALIWALLFTT LGYLGGEVIA PWLHDLDQHL RHGVWLILAI VLVVGVRWWL
KRRGKAEAR