Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2490 |
Symbol | thiD |
ID | 6874018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2370991 |
End bp | 2371791 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642785571 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_002216229 |
Protein GI | 198243934 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAA TTAACGCGCT GACGATTGCC GGCACCGATC CCAGCGGCGG GGCCGGTATC CAGGCGGATC TCAAGACCTT TTCCGCGCTG GGCGCATATG GCTGTTCGGT CATCACCGCG CTGGTGGCGC AAAATACCTG TGGCGTACAG TCGGTGTACC GGATAGAGCC GGACTTTGTC GCCGCTCAAC TTGATTCCGT GTTCAGCGAT GTGCGCATTG ATACCACAAA AATCGGCATG CTGGCGGAAA CCGATATTGT CGAGGCCGTG GCGGAGCGAC TACAGCGTCA TCATGTACGT AATGTGGTGC TGGATACGGT GATGCTGGCG AAAAGCGGCG ATCCGCTGCT CTCGCCCTCT GCGATAGAAA CATTACGCGT CCGGCTGTTG CCACAGGTAT CGCTGATTAC GCCTAATTTG CCGGAAGCCG CAGCGTTGCT GGATGCGCCC CATGCACGTA CGGAACAGGA GATGCTGGCG CAGGGGCGGG CGTTACTGGC GATGGGGTGT GAAGCGGTAT TGATGAAAGG CGGGCATTTA GAGGATGCGC AAAGCCCGGA CTGGCTCTTT ACCCGTGAGG GCGAGCAACG TTTTAGCGCG CCGCGTGTGA ACACCAAAAA TACGCATGGG ACGGGCTGTA CGCTGTCGGC GGCGCTGGCG GCGTTACGGC CCCGGCATCG CTGTTGGGGA GAGACGGTAA ACGAGGCGAA GGCATGGCTT TCGGCGGCGC TGGCGCAGGC GGACACGCTG GAAGTGGGGA AGGGCATTGG TCCGGTACAT CATTTCCACG CGTGGTGGTA G
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Protein sequence | MQRINALTIA GTDPSGGAGI QADLKTFSAL GAYGCSVITA LVAQNTCGVQ SVYRIEPDFV AAQLDSVFSD VRIDTTKIGM LAETDIVEAV AERLQRHHVR NVVLDTVMLA KSGDPLLSPS AIETLRVRLL PQVSLITPNL PEAAALLDAP HARTEQEMLA QGRALLAMGC EAVLMKGGHL EDAQSPDWLF TREGEQRFSA PRVNTKNTHG TGCTLSAALA ALRPRHRCWG ETVNEAKAWL SAALAQADTL EVGKGIGPVH HFHAWW
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