Gene SeD_A2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2489 
Symbol 
ID6873946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2370209 
End bp2370955 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content53% 
IMG OID642785570 
ProductGntR family transcriptional regulator 
Protein accessionYP_002216228 
Protein GI198244622 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAG CGCATACCCG GCTCATCGCG CAACTGAATG AACGAATTTC AGCGGCGGAT 
AATACGCCGC TATACATGAA ATTCGCCCAG ACGGTAAAGG ATGCCGTGCG CAGCGGTATT 
CTTGAGCACG GTAATATTTT GCCTGGCGAA CGCGATCTCA GCCAGCTTAC CGGCGTCTCG 
CGCATCACGG TACGAAAAGC GATGCAGGCG CTGGAAGAAG AGGGGGTCGT CACGCGCGCC 
CGCGGCTACG GTACGCAAAT CAATAATATC TTTGAATATT CCCTGAAAGA GGCGCGGGGA 
TTTTCTCAGC AGGTTGTCTT GCGCGGCAAA AAACCGGATA CGCTATGGGT TAACAAACGC 
GTGGTAAGTT GTCCGGATGA GGTCGCGCAG CATCTGGCGA TCCCCGCAGG CAGCGACGTC 
TTTTTACTCA AACGCATTCG TTATGTTGAT GAGGACGCGG TATCGATTGA AGAGTCCTGG 
GTGCCCGCGC ATCTGATTCA TGATGTCGAC GCGATTGGCA TTTCGCTGTA TGACTATTTT 
CGTCGCCAGC ACATTTACCC TCAGCGTACC CGATCCCGCG TCAGCGCCCG GATGCCGGAT 
GATGAGTTTC AGTCGCATAT TCAAATGGAT GGTAAAGTGC CGGTGCTGGT GATTAAGCAG 
GTGGCGCTCG ATCAGCAGCA GCGGCCTATT GAATACAGCA TCAGTTATTG TCGTAGCGAC 
CTATACGTTT TTGTGTGCGA GGAGTAG
 
Protein sequence
MEQAHTRLIA QLNERISAAD NTPLYMKFAQ TVKDAVRSGI LEHGNILPGE RDLSQLTGVS 
RITVRKAMQA LEEEGVVTRA RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR 
VVSCPDEVAQ HLAIPAGSDV FLLKRIRYVD EDAVSIEESW VPAHLIHDVD AIGISLYDYF 
RRQHIYPQRT RSRVSARMPD DEFQSHIQMD GKVPVLVIKQ VALDQQQRPI EYSISYCRSD 
LYVFVCEE