| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2461 |
|---|
| Symbol | |
|---|
| ID | 6875516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2336614 |
|---|
| End bp | 2338470 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642785549 |
|---|
| Product | putative assembly protein |
|---|
| Protein accession | YP_002216207 |
|---|
| Protein GI | 198245281 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.45795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAT TTCTGACGAC GCTGATGATT CTCCTGGTCG TGCTGGTGGC CGGATTCTCT
GCGTTGGTAT TGTTGGTCAA TCCGAATGAT TTCCGCGCCT ATATGGTGCA GCAGGTTGCC
GCGCGTAGTG AATACCAGTT GCAACTGGAC GGGCCGCTGC GCTGGCACGT ATGGCCGCAA
CTCAGCATCC TTTCCGGGCG AATGACGCTA ACGGCGCGAG GCGCCAGCGA ACCGCTGGTG
CGGGCTGACA ATATGCGCCT GGATGTCGCT TTATGGCCGC TGTTGAGTCA TCAGCTTCAT
GTTAAGCAGG TGATGCTGAA AGGCGGGGTG ATTCAACTGA CGCCGCAAAC GGAAGCGGTA
CGCAGTGATG ATGCGCCGGT CGCGCCGAAA GATAATACCT TGCCGGACGT AGCGGAAGAT
CGCGGCTGGT CGTTTGATAT TCGTAGCCTG CGCGTTGCCG ACAGCGTGCT GGTTTTCCAG
CATGAAAATG ATGATCAGGT CACGGTGCGC GATATTCGTC TGAATATGGA ACAAGATGCC
GAGCATCGCG GCACGTTTGA TTTTTCGGGA CGCGTGAACC GCGATCAGCG GGATCTTGCT
TTATCGTTCA GCGGAACGGT GGATGCTTCC GATTATCCGC ATAACTTAAC CGCGAGTATT
GAGCAACTGC GCTGGCAATT GCAGGGCGCG GATTTACCGG CGCAGGGGAT TGAGGGGCAG
GGACAGCTGC AGGCGCAGTG GCAGGAGGCG CAAAAACGTC TTTCATTTAA CCACTTAAAT
TTAACGGCGA ATGACAGTTC TCTGACCGGA CACGTTCAGG TAACGCTGGC GGAGCAGCCG
GAATGGCAAA TTGACCTCCA GTCCAGCAAG CTTAATCTGG ACAACCTGTT GCCGCATCAT
AGCGCCGTGG CTCAGACGGG CGGCGCGGTG TCGCAGGGGC AAAATACGCT CCCCCTGACC
AGGCCAGTTA TCGCGTCGCG TGTTGGTGCG CCGCCTTATC AGGGGCTGCA AAGCTTTACG
GCGGAGATTG CTTTACAGGC GGATTCAGTT CGCTGGCGGG GAATGGACTT TACCCAGGTT
TCGACGAAGA TGTCTAATCA GGCCGGATTG CTGGATATTA CCGAGTTGCA GGGGAAACTG
GCCGACGGAG AGATGTCGCT GCCCGGCACG CTTGACGCCC GCACCGCCAG TCCACGCATC
GAGTTCCACC CTCGCCTCAA CCATGTTGAG ATTGGGACTA TCCTGAAAGC CTTCAATTAT
CCGATTAGCC TGACCGGTAA GATGTCGCTG GTTGGCGATT TCTCCGGGGC GGATATTGAC
GCGGAGGCAT TTCGCCACAG CTGGAAAGGA AAAGCGCATG TTGACATGAG CAATACGCGC
CTCGAAGGAA TGAATTTCCA GCAACTGGTG CAGCAGGCCG TAGAGCGAAG CGGCGGCGAC
GCGCAGCAGT CGCAGGAAAA TATGGACAAC GCGACCCGAC TGGATCGCTT CACGACCGAT
CTGACGCTAA ATAAGGGCAC GCTGACGCTC GACGACATGG TCGGGCAATC TTCTATGCTG
GCGTTAACCG GCAGCGGAAC GCTGGACCTG GTTAAGCAGA GCTGTGATAC GCAATTTAAT
CTGCGTGTGC TGGGCGGCTG GAACGGCGAT AGCAACCTGA TCACCTTCCT GAAAGAGACG
CCGGTGCCGC TGCGCGTCTA TGGCAAGTGG CAGGAGCTGA ACTATACCCT GCAAGTGGAT
CAGTTATTGC GTAAGCATTT ACAGGATGAG GCGAAGCGTC GGCTCAACGA CTGGGCGGAG
CGCAATAAAG ATACCCGCAA TGGTAAAGAT GTGAAGAAAC TGCTGGATAA GCTGTAG
|
|---|
| Protein sequence | MRRFLTTLMI LLVVLVAGFS ALVLLVNPND FRAYMVQQVA ARSEYQLQLD GPLRWHVWPQ
LSILSGRMTL TARGASEPLV RADNMRLDVA LWPLLSHQLH VKQVMLKGGV IQLTPQTEAV
RSDDAPVAPK DNTLPDVAED RGWSFDIRSL RVADSVLVFQ HENDDQVTVR DIRLNMEQDA
EHRGTFDFSG RVNRDQRDLA LSFSGTVDAS DYPHNLTASI EQLRWQLQGA DLPAQGIEGQ
GQLQAQWQEA QKRLSFNHLN LTANDSSLTG HVQVTLAEQP EWQIDLQSSK LNLDNLLPHH
SAVAQTGGAV SQGQNTLPLT RPVIASRVGA PPYQGLQSFT AEIALQADSV RWRGMDFTQV
STKMSNQAGL LDITELQGKL ADGEMSLPGT LDARTASPRI EFHPRLNHVE IGTILKAFNY
PISLTGKMSL VGDFSGADID AEAFRHSWKG KAHVDMSNTR LEGMNFQQLV QQAVERSGGD
AQQSQENMDN ATRLDRFTTD LTLNKGTLTL DDMVGQSSML ALTGSGTLDL VKQSCDTQFN
LRVLGGWNGD SNLITFLKET PVPLRVYGKW QELNYTLQVD QLLRKHLQDE AKRRLNDWAE
RNKDTRNGKD VKKLLDKL
|
|---|
| |