Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2456 |
Symbol | |
ID | 6871606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2330523 |
End bp | 2332682 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785545 |
Product | tyrosine kinase |
Protein accession | YP_002216203 |
Protein GI | 198243583 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.0354521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAA AAGTAAAACA ATCTGCGGCG GTTACGGGTA GCGATGAAAT CGATATCGGG CGCCTGGTCG GAACGGTGAT TGAAGCGCGT TGGTGGGTGT TGGGGACGAC GGCCATATTT GCGCTGTGCG CGGTAATTTA TACGTTCTTC GCCACGCCCA TCTATAGCGC CGATGCGCTG GTGCAGATTG AACAAAACGC CGGTAATTCG CTGGTACAGG ATATCAACAG TGCATTAGCG AATAAGCCGC CGGCTTCCGA TGCGGAAATT CAGCTCATTC GATCGCGCCT GGTGCTTGGG AAGACCGTTG ACGATCTGGA TCTGGATATT GCCGTCACCA AAAACACCTT TCCGCTGTTC GGCGCCGGGT GGGAACGGCT GATGGGGCGT CACAATGAAA TGGTGAAAGT CACGACATTC ACCCGACCAG AGACGATGAG CGGACAGATC TTCACCCTCA AAGTGCTGGG CGACAAACGT TATCAGTTGG TTAGCGACGG CGGATTTAGC GCGCAGGGCG TTGTGGGCCA GCCACTCAAT AAAGACGGCG TGACGATGCA GGTAGAGGCG ATTGACGCCC GTCCTGATAC AGAATTTACG GTGAGTAAAT TCTCAACGCT TGGCATGATT AATAACCTGC AAAATAACCT CACCGTAACG GAAACCGGCA AAGATACCGG CGTTCTGAGC CTGACGTTCA CGGGAGAGGA TCGCGACCAG ATCCGCGAAA TTCTCAACAG TATTACCCGT AACTATCTGC AACAGGATAT TGCGCGGAAA TCTGAAGAGG CGGGGAAGAG CCTGGCGTTT CTGGCAAAAC AACTGCCGGA AGTCCGCAGC CGTCTGGATG TGGCGGAAAA CAAGCTAAAC GCTTTCCGCC AGGATAAAGA CTCGGTGGAT TTACCGCTGG AGGCGAAGGC GGTGCTCGAT TCGATGGTTA ATATCGACGC CCAGTTGAAT GAGTTGACGT TTAAAGAGGC GGAAATTTCC AAGCTCTTTA CCAAAGCGCA TCCGGCCTAC CGCACCCTGC TGGAAAAACG TAAAGCGCTG GAAGATGAAA AAGCCAAACT GAACGGGCGG GTGACGGCAA TGCCGAAAAC CCAGCAGGAG ATTGTGCGTT TGACCCGCGA TGTGGAGTCC GGCCAGCAGG TTTATATGCA ACTGCTTAAT AAACAGCAGG AGCTGAAAAT CACCGAAGCC AGCACCGTTG GCGATGTGCG CATCGTTGAC CCGGCGATTA CCCAGCCGGG CGTGCTGAAG CCGAAAAAGG CGTTGATTAT TCTCGGCAGC ATTATTCTGG GATTAATGTT ATCGATTGTC GGCGTGCTGC TGCGCTCGCT GTTTAATCGC GGTATCGAAA GCCCGCAGGC GCTGGAGGAG CACGGGATCA GCGTCTATGC CAGTATTCCG CTGTCGGAAT GGCAAAAAGC GCGCGATAGC GTCAAAACCA TTAAAGGGAT TAAGCGTTAC AAGCAGAGCC AACTGCTGGC GGTGGGCAAT CCGACCGATC TGGCGATTGA GGCGATTCGC AGCCTGCGCA CCAGCCTCCA TTTCGCCATG ATGCAGGCGC AAAATAATGT ACTCATGCTC ACAGGCGTCA GCCCCTCTAT CGGTAAAACC TTTGTTTGCG CCAACCTGGC GGCCGTCATC AGCCAGACGC ATAAACGGGT ATTACTGATC GACTGCGATA TGCGCAAGGG CTACACCCAT GAACTGCTCG GCACCAATAA CGTGGACGGC TTATCTGACA TTCTGGCGGG CAAAGGCGAG ATAGCCTCCT GCGCGAAACC TACGGCGATC GCTAATTTTG ATCTTATTCC GCGCGGTCAG GTGCCGCCTA ATCCATCGGA ACTGCTGATG AGCGAGCGCT TCGGCGAGCT GATCGCCTGG GCAAGCAGCC GCTACGACCT GGTATTAATC GACACGCCGC CGATTCTGGC CGTGACGGAC GCCGCGATTG TGGGTCGCCA CGTCGGGACG ACGCTGATGG TGGCGCGTTA TGCCGTCAAC ACCTTAAAAG AGGTGGAAAC CAGTCTGAGC CGTTTTGACC AGAATGGCAT TCAGGTCAAA GGCGTCATTC TCAACTCCAT TTTTCGCCGG GCGACGGGCT ACCAGGATTA TGGTTATTAC GAGTATGAAT ACCAGTCAGA TTCCAAATAA
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Protein sequence | MTEKVKQSAA VTGSDEIDIG RLVGTVIEAR WWVLGTTAIF ALCAVIYTFF ATPIYSADAL VQIEQNAGNS LVQDINSALA NKPPASDAEI QLIRSRLVLG KTVDDLDLDI AVTKNTFPLF GAGWERLMGR HNEMVKVTTF TRPETMSGQI FTLKVLGDKR YQLVSDGGFS AQGVVGQPLN KDGVTMQVEA IDARPDTEFT VSKFSTLGMI NNLQNNLTVT ETGKDTGVLS LTFTGEDRDQ IREILNSITR NYLQQDIARK SEEAGKSLAF LAKQLPEVRS RLDVAENKLN AFRQDKDSVD LPLEAKAVLD SMVNIDAQLN ELTFKEAEIS KLFTKAHPAY RTLLEKRKAL EDEKAKLNGR VTAMPKTQQE IVRLTRDVES GQQVYMQLLN KQQELKITEA STVGDVRIVD PAITQPGVLK PKKALIILGS IILGLMLSIV GVLLRSLFNR GIESPQALEE HGISVYASIP LSEWQKARDS VKTIKGIKRY KQSQLLAVGN PTDLAIEAIR SLRTSLHFAM MQAQNNVLML TGVSPSIGKT FVCANLAAVI SQTHKRVLLI DCDMRKGYTH ELLGTNNVDG LSDILAGKGE IASCAKPTAI ANFDLIPRGQ VPPNPSELLM SERFGELIAW ASSRYDLVLI DTPPILAVTD AAIVGRHVGT TLMVARYAVN TLKEVETSLS RFDQNGIQVK GVILNSIFRR ATGYQDYGYY EYEYQSDSK
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