Gene SeD_A2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2453 
Symbol 
ID6873604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2327889 
End bp2329106 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content56% 
IMG OID642785542 
Productputative glycosyl transferase 
Protein accessionYP_002216200 
Protein GI198243685 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.449849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0475636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC TGCAATTTAA TGTACGGCTG GCGGAAGGCG GCGCGGCGGG AGTGGCGTTG 
GATCTCCATC TGCGGGCGCT GCAAAAAGGG CTGACGTCAC GTTTTGTCTA TGGTTATGGC 
AAAGGCGGAA AAAAAAGCGT CAGCCACCAC CGTTATCCGC AGGTGATAAA ACAGACGCCG 
CGCGGCACGG CAATCGCTAA TATCGCGCTG TTTCGTTTCC TGAATCGCGA TCTGTTTGGC 
AATCTCGACA ATCTTTACCG CACGGTTATC CAGACATCCG GCCCGCTGGT GCTGCATTTT 
CATGTTCTCC ACAGTTACTG GCTAAACCTG GCGGATATCG TGACGTTTTG CGAAAAAGTC 
AAAGCGCAAA AACCGGACGT CACGCTGGTC TGGACGCTGC ACGATCACTG GAGCGTCACC 
GGGCGTTGCG CCTTCACCGA CGGTTGCGAG GGCTGGAAAA GCGGCTGCCA AAAATGTCCG 
ACCCTAAGCA ATTATCCGCC GGTCAGGGTG GATCGGGCGC ACCAGCTTAT TGGCGGCAAA 
CGTCAGCGCT TTCGGGACAT GCTGCGGCTG GGCTGCCAGT TTATTTCGCC GAGCCAGCAT 
GTGGCCGAGG CCTTTAACAG CGTTTATGGC GCGGGACTCT GCCGGGTGAT TAACAACGGT 
ATCGATCTGG CGACCGAGGC GATTCTCGCG CAACTATCAC CTGTGCCGCT GAATCCGGGC 
AAACCGCGGA TCGCCATTGT GGCGCATGAC TTGCGTTACG ACGGCAAAAC TGACCAGCGT 
CTGGTACACG ACATGATGGC GCTGGGCGAA AAAATTGAAC TGCATACCTT CGGTAAATTT 
TCGCCTTTTA CCGGCCAAAA CGTTGTTAAT CACGGTTTTG AAACCGATAA GCGCAAATTA 
ATGAGCGCGC TCAATGAGAT GGATGCGCTG GTCTTTAGCT CGCGGGTCGA TAACTATCCG 
CTGATCTTGT GTGAAGCGCT CTCGATCGGC GTACCGGTGC TCGCTACCCA CAGCGAGGCG 
GCGCAGGAGG TGCTGGCGAA ATCCGGCGGC CAGACCTTTG CCGCTACAGA TGTACTGCGC 
CTGGCGCAGC GGCGTAAGCC AGAGATTGCT CAGGCGGTAT TTGGCGCCAC GCTGGACGCC 
TTTCGTATGC GTAGCCGCGT CGCGTACAGC GGTCAACAGA TGCTGGAGGA GTATGTCTCG 
TTCTATCAGA ATCTGTAG
 
Protein sequence
MNILQFNVRL AEGGAAGVAL DLHLRALQKG LTSRFVYGYG KGGKKSVSHH RYPQVIKQTP 
RGTAIANIAL FRFLNRDLFG NLDNLYRTVI QTSGPLVLHF HVLHSYWLNL ADIVTFCEKV 
KAQKPDVTLV WTLHDHWSVT GRCAFTDGCE GWKSGCQKCP TLSNYPPVRV DRAHQLIGGK 
RQRFRDMLRL GCQFISPSQH VAEAFNSVYG AGLCRVINNG IDLATEAILA QLSPVPLNPG 
KPRIAIVAHD LRYDGKTDQR LVHDMMALGE KIELHTFGKF SPFTGQNVVN HGFETDKRKL 
MSALNEMDAL VFSSRVDNYP LILCEALSIG VPVLATHSEA AQEVLAKSGG QTFAATDVLR 
LAQRRKPEIA QAVFGATLDA FRMRSRVAYS GQQMLEEYVS FYQNL