Gene SeD_A2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2425 
Symbol 
ID6875263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2296682 
End bp2297743 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content34% 
IMG OID642785515 
Producthypothetical protein 
Protein accessionYP_002216173 
Protein GI198244018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.274223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000381891 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGTTA ACCTATCACG TTTAGGTAAA AGTGGTACGG GAATGTGGCA ATACTCGATT 
AAATTTTTAA CGGCACTGCG AGAAATAGCT GATGTTGACG CAATAATCTG TAGCAAGGTA 
CACGCTGATT ATTTTGAAAA GCTCGGTTAT GCAGTAGTTA CTGTTCCGAA TATTGTTAGC 
AACACATCAA AAACATCGCG ACTTAGACCA TTAGTATGGT ATGTATATAG TTACTGGCTT 
GCGCTGAGGG TTTTAATTAA GTTTGGTAAT AAAAAATTGG TGTGTACTAC ACATCACACT 
ATCCCCTTAC TGAGAAACCA AACGATAACC GTACATGATA TAAGACCTTT TTATTATCCA 
GATAGTTTTA TTCAGAAAGT GTATTTTCGC TTTTTATTAA AAATGTCCGT TAAGCGATGT 
AAGCATGTTT TAACGGTATC TTATACCGTT AAAGATAGCA TTGCTAAAAC TTATAATGTA 
GATAGTGAGA AAATATCAGT AATTTATAAT AGTGTTAATA AATCTGATTT TATACAAAAA 
AAAGAAAAAG AGAATTACTT TTTAGCTGTT GGTGCAAGTT GGCCACATAA AAATATTCAT 
TCATTCATAA AAAATAAAAA AGTTTGGTCT GACTCTTATA ATTTAATTAT TGTATGTGGT 
CGTACTGACT ATGCAATGTC TCTCCAACAA ATGGTCGTTG ATCTGGAACT AAAAGATAAA 
GTGACTTTTT TACATGAAGT CTCATTTAAT GAATTAAAGA TTTTATATTC TAAAGCCTAC 
GCGCTTGTTT ATCCATCTAT TGATGAGGGT TTTGGTATAC CTCCTATTGA AGCGATGGCA 
TCAAATACTC CAGTTATAGT GTCCGATATA CCAGTATTTC ATGAAGTGTT AACCAATGGT 
GCATTATATG TGAATCCGGA TGATGAAAAA AGCTGGCAGA GTGCAATTAA AAATATAGAG 
CAGTTGCCTG ATGCAATTTC CCGATTTAAC AACTATGTCG CACGGTATGA CTTTGATAAT 
ATGAAGCAGA TGGTTGGCAA TTGGTTGGCG GAATCAAAAT AA
 
Protein sequence
MIVNLSRLGK SGTGMWQYSI KFLTALREIA DVDAIICSKV HADYFEKLGY AVVTVPNIVS 
NTSKTSRLRP LVWYVYSYWL ALRVLIKFGN KKLVCTTHHT IPLLRNQTIT VHDIRPFYYP 
DSFIQKVYFR FLLKMSVKRC KHVLTVSYTV KDSIAKTYNV DSEKISVIYN SVNKSDFIQK 
KEKENYFLAV GASWPHKNIH SFIKNKKVWS DSYNLIIVCG RTDYAMSLQQ MVVDLELKDK 
VTFLHEVSFN ELKILYSKAY ALVYPSIDEG FGIPPIEAMA SNTPVIVSDI PVFHEVLTNG 
ALYVNPDDEK SWQSAIKNIE QLPDAISRFN NYVARYDFDN MKQMVGNWLA ESK